RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GPR45Q9Y5Y3 372 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 ZCCHC18P0CG32 403 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 EPHA5P54756 1037 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 ULK4Q96C45 1275 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DCUN1D1Q96GG9 259 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 LYSMD1Q96S90 227 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PCDH12Q9NPG4 1184 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DUS2Q9NX74 493 aaKnown RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 TMPRSS11EQ9UL52 423 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 ITM2BQ9Y287 266 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 OARD1Q9Y530 152 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 REV3LO60673 3130 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 KPNA3O00505 521 aaPredicted RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 SLC22A3O75751 556 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 CA3P07451 260 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DDX6P26196 483 aaKnown RBP eCLIP11.57□□□□□ -0.56
VTA1-203ENST00000452973 RPIAP49247 311 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 ATP4BP51164 291 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 NFYCQ13952 458 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DHCR24Q15392 516 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 IL23RQ5VWK5 629 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PSRC1Q6PGN9 363 aaPredicted RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 C12orf40Q86WS4 652 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 VRK3Q8IV63 474 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 SFRP1Q8N474 314 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 GALNT4Q8N4A0 578 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 SMG7Q92540 1137 aaKnown RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 ASB9Q96DX5 294 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 MCCC1Q96RQ3 725 aaPredicted RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 PKP2Q99959 881 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 NUSAP1Q9BXS6 441 aaKnown RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 SLAMF8Q9P0V8 285 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DLGAP2Q9P1A6 1054 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PTBP2Q9UKA9 531 aaKnown RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 LZTS1Q9Y250 596 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 RNF11Q9Y3C5 154 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 VPS4BO75351 444 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 FGF19O95750 216 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 OTCP00480 354 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 CTSLP07711 333 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 OR56A5P0C7T3 313 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 DGKGP49619 791 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 HMGCS1Q01581 520 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 BLMHQ13867 455 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PCBP2Q15366 365 aaKnown RBP eCLIP11.57□□□□□ -0.562e-6■□□□□ 10.9
VTA1-203ENST00000452973 CPSF6Q16630 551 aaKnown RBP eCLIP11.57□□□□□ -0.56
VTA1-203ENST00000452973 AP5B1Q2VPB7 878 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 ADGRD2Q7Z7M1 963 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 LILRA2Q8N149 483 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 AHI1Q8N157 1196 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 RHBDF1Q96CC6 855 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 TMEM79Q9BSE2 394 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 WRAP53Q9BUR4 548 aaKnown RBP11.57□□□□□ -0.56
VTA1-203ENST00000452973 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 FAM83DQ9H4H8 585 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PFDN4Q9NQP4 134 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 KCTD5Q9NXV2 234 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 PKD2L2Q9NZM6 624 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 SUN2Q9UH99 717 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 SLC8A2Q9UPR5 921 aa11.57□□□□□ -0.56
VTA1-203ENST00000452973 CCDC154A6NI56 674 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 NME4O00746 187 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 INPP4BO15327 924 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 G6PDP11413 515 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 HLA-EP13747 358 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 SLC2A4P14672 509 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 METAP1P53582 386 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 ERVK-8P63133 956 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 GSTA3Q16772 222 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 RFTN2Q52LD8 501 aaPredicted RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 XKR7Q5GH72 579 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 RABL3Q5HYI8 236 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PAGE3Q5JUK9 113 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PRSS36Q5K4E3 855 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 SAMD4BQ5PRF9 694 aaKnown RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 UBE2R2Q712K3 238 aaPredicted RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 EFL1Q7Z2Z2 1120 aaKnown RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 ADGRG6Q86SQ4 1221 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 RIOK2Q9BVS4 552 aaKnown RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 CD244Q9BZW8 370 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 AIG1Q9NVV5 245 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 DTNAQ9Y4J8 743 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 POLR3HQ9Y535 204 aaPredicted RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 LOC730098B7Z3J9 87 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PFKLP17858 780 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 GGT5P36269 586 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 GRIA3P42263 894 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 TRAF3Q13114 568 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 GRIN2CQ14957 1233 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 SPATA19Q7Z5L4 167 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PDSS2Q86YH6 399 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PDPRQ8NCN5 879 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 FRS2Q8WU20 508 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PPWD1Q96BP3 646 aaKnown RBP11.56□□□□□ -0.56
VTA1-203ENST00000452973 VCX3BQ9H321 246 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 TMEM181Q9P2C4 612 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms