RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 UBXN4Q92575 508 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 HES6Q96HZ4 224 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ELMO2Q96JJ3 720 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 DNAJC1Q96KC8 554 aaKnown RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 INSM2Q96T92 566 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 PDE7BQ9NP56 450 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 HRASLS2Q9NWW9 162 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 COLEC10Q9Y6Z7 277 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 J3QKU1 62 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 CCL22O00626 93 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 TPH1P17752 444 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 PRLHRP49683 370 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 GDF10P55107 478 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 MC1RQ01726 317 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 SEPT6Q14141 434 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 MAP7Q14244 749 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 DNTTIP2Q5QJE6 756 aaKnown RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 SEL1L2Q5TEA6 688 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 ARMC6Q6NXE6 501 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 DUS1LQ6P1R4 473 aaKnown RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 C6orf15Q6UXA7 325 aaPredicted RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 TAS2R42Q7RTR8 314 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 PRICKLE2Q7Z3G6 844 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 OOSP2Q86WS3 158 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 TAB3Q8N5C8 712 aaPredicted RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 SIDT2Q8NBJ9 832 aaKnown RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 SLC35B2Q8TB61 432 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 HM13Q8TCT9 377 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 CCM2Q9BSQ5 444 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 VPS37BQ9H9H4 285 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 LNPEPQ9UIQ6 1025 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
CHD3-206ENST00000452447 HEBP2Q9Y5Z4 205 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 NBASA2RRP1 2371 aa12.59□□□□□ -0.39
CHD3-206ENST00000452447 IGHV5-51A0A0C4DH38 117 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 TCRBV7S2A1N4TA0A589 114 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
CHD3-206ENST00000452447 NKX2-8O15522 239 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 SGTAO43765 313 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 KRT86O43790 486 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 SLC28A2O43868 658 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 KIAA0754O94854 1291 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 AP2A1O95782 977 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 GAS8O95995 478 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 CCNYL3P0C7X3 344 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 PRKAR1AP10644 381 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 FGF5P12034 268 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 ZNF28P17035 718 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 NDUFS1P28331 727 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 STIP1P31948 543 aaKnown RBP12.58□□□□□ -0.4
CHD3-206ENST00000452447 STAT5AP42229 794 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 CCR10P46092 362 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 PPP1CAP62136 330 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 ZNF449Q6P9G9 518 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 SERPINA9Q86WD7 417 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 GALNT6Q8NCL4 622 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 STYXQ8WUJ0 223 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 STARD8Q92502 1023 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 RNF31Q96EP0 1072 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 CD180Q99467 661 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 MAP3K3Q99759 626 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 KIR3DX1Q9H7L2 352 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 NLE1Q9NVX2 485 aaPredicted RBP12.58□□□□□ -0.4
CHD3-206ENST00000452447 GEMIN8Q9NWZ8 242 aaKnown RBP12.58□□□□□ -0.4
CHD3-206ENST00000452447 IL17BQ9UHF5 180 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 SLC24A2Q9UI40 661 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 RARRES3Q9UL19 164 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 GUCA1BQ9UMX6 200 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
CHD3-206ENST00000452447 OR5K3A6NET4 321 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 H7C0S8 307 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 IFRD1O00458 451 aaPredicted RBP12.57□□□□□ -0.4
CHD3-206ENST00000452447 IFNB1P01574 187 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 MT-ND3P03897 115 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 ACRV1P26436 265 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 DLSTP36957 453 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 LMAN1P49257 510 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 CDKN1CP49918 316 aaPredicted RBP12.57□□□□□ -0.4
CHD3-206ENST00000452447 ACY1Q03154 408 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 PRKAA1Q13131 559 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 TUBB3Q13509 450 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHD3-206ENST00000452447 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 KMT5CQ86Y97 462 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 UBE2Q2Q8WVN8 375 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 ATG4AQ8WYN0 398 aa12.57□□□□□ -0.4
CHD3-206ENST00000452447 CDKN2AIPNLQ96HQ2 116 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms