RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PGAM1P18669 254 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A6P19224 532 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A1P22309 533 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A4P22310 534 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CSF2RBP32927 897 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A3P35503 534 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 HMGCLP35914 325 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 HADHAP40939 763 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 ELK3P41970 407 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 MAGEA4P43358 317 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 FASLGP48023 281 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 LIMK2P53671 638 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 TMPRSS3P57727 454 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 HHEXQ03014 270 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CLN3Q13286 438 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 MSLNQ13421 630 aaPredicted RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 TGIF1Q15583 401 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 ZDHHC20Q5W0Z9 365 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 PDPK2PQ6A1A2 396 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 RELL1Q8IUW5 271 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 FBXO36Q8NEA4 188 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 GDAP1Q8TB36 358 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CCDC97Q96F63 343 aaPredicted RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 AHCYL2Q96HN2 611 aaKnown RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 TTC25Q96NG3 672 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 PLEKHG4BQ96PX9 1271 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 KIFC1Q9BW19 673 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A7Q9HAW7 530 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A10Q9HAW8 530 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A8Q9HAW9 530 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 IL26Q9NPH9 171 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 IL17CQ9P0M4 197 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 ZC3H7BQ9UGR2 993 aaKnown RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CHMP2BQ9UQN3 213 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 TEX264Q9Y6I9 313 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 A6NCN8 305 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 CHUKO15111 745 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 POLR3GO15318 223 aaPredicted RBP16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 GPR39O43194 453 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 USP1O94782 785 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 CDK14O94921 469 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 GSTA2P09210 222 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 F3P13726 295 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 ZNF7P17097 686 aaPredicted RBP16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 CA5AP35218 305 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 MAPK9P45984 424 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 CRADDP78560 199 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 CHRNA6Q15825 494 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 INSCQ1MX18 579 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 MSS51Q4VC12 460 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 SNAP47Q5SQN1 464 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 TSTD2Q5T7W7 516 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 FAM151BQ6UXP7 276 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 SLC9B2Q86UD5 537 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 LRRTM4Q86VH4 590 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 ZFAND4Q86XD8 727 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 ANKMY2Q8IV38 441 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 MPP5Q8N3R9 675 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 GABPB2Q8TAK5 448 aaPredicted RBP16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 TMEM159Q96B96 161 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 UBL7Q96S82 380 aaPredicted RBP16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 FOXJ2Q9P0K8 574 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 SCHIP1Q9P0W5 487 aaPredicted RBP16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 PCDHGA7Q9Y5G6 932 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 ARL5AQ9Y689 179 aa16.74■□□□□ 0.27
PRPF40A-204ENST00000450303 MROH6A6NGR9 719 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 A8MU76 341 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 C9orf172C9J069 976 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 KMOO15229 486 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 LDB2O43679 373 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SPAG6O75602 509 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SPAM1P38567 509 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 UCNP55089 124 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 TMEM115Q12893 351 aaPredicted RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SEPT7Q16181 437 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SPANXN3Q5MJ09 141 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 HP1BP3Q5SSJ5 553 aaPredicted RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 TRMT10CQ7L0Y3 403 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 ZNF547Q8IVP9 402 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 GSPT2Q8IYD1 628 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 OR4D9Q8NGE8 314 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 OR10G6Q8NH81 332 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 NCSTNQ92542 709 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 ZNF669Q96BR6 464 aaPredicted RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 VPS35Q96QK1 796 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 TBC1D10AQ9BXI6 508 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 STN1Q9H668 368 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 SARS2Q9NP81 518 aaKnown RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 CHRAC1Q9NRG0 131 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 NLE1Q9NVX2 485 aaPredicted RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 AKAP7Q9P0M2 348 aaPredicted RBP16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 RPS6KL1Q9Y6S9 549 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 BPTFQ12830 3046 aa16.73■□□□□ 0.27
PRPF40A-204ENST00000450303 EIF4E1BA6NMX2 242 aaKnown RBP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 NVLO15381 856 aaKnown RBP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 VEGFDO43915 354 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 BANF1O75531 89 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PRB1P04280 392 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms