RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 AVPR2P30518 371 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 CNR2P34972 360 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 MDH1P40925 334 aaKnown RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 MAPK9P45984 424 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 SERPINB4P48594 390 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 THOP1P52888 689 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 BOP1Q14137 746 aaKnown RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 CRTC3Q6UUV7 619 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 STAG3L4Q8TBR4 150 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 TMEM159Q96B96 161 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 SLC6A18Q96N87 628 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 ATOH8Q96SQ7 321 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 CCDC134Q9H6E4 229 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 EIF2B4Q9UI10 523 aaKnown RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 SLCO1B1Q9Y6L6 691 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 ZFC3H1O60293 1989 aaKnown RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 SPAG17Q6Q759 2223 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 G3V2L1 256 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 TK2O00142 265 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 POLR3GO15318 223 aaPredicted RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 KERAO60938 352 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 GLRBP48167 497 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 LRP8Q14114 963 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 TUBB8Q3ZCM7 444 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 WDR45BQ5MNZ6 344 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 HHATQ5VTY9 493 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 PMS2CLQ68D20 193 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 SBSNQ6UWP8 590 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 LPCAT2Q7L5N7 544 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 PIWIL4Q7Z3Z4 852 aaKnown RBP18.9■□□□□ 0.62
RPS28-202ENST00000449223 ADAMTSL2Q86TH1 951 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 GALNT13Q8IUC8 556 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 IKZF3Q9UKT9 509 aa18.9■□□□□ 0.62
RPS28-202ENST00000449223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 MATN4O95460 622 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 THEGLP0DJG4 465 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 CD38P28907 300 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 CLCNKAP51800 687 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 IL9RQ01113 521 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 PCLAFQ15004 111 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 OR4D1Q15615 310 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 TSNQ15631 228 aaKnown RBP18.89■□□□□ 0.61
RPS28-202ENST00000449223 PPP1R3AQ16821 1122 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 SYTL3Q4VX76 610 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 METRNLQ641Q3 311 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 ENPP7Q6UWV6 458 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 NAPRTQ6XQN6 538 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 VRK3Q8IV63 474 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 TMEFF1Q8IYR6 380 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 MGARPQ8TDB4 240 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 OR1E3Q8WZA6 343 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 KLHDC7BQ96G42 594 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 PDXPQ96GD0 296 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 ALG9Q9H6U8 611 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 TM9SF3Q9HD45 589 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 SIRPGQ9P1W8 387 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 KLQ9UEF7 1012 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 SLC23A2Q9UGH3 650 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 ZNHIT2Q9UHR6 403 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 ADAM21Q9UKJ8 722 aa18.89■□□□□ 0.61
RPS28-202ENST00000449223 GFYI3L273 518 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 CDC7O00311 574 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 BTN3A1O00481 513 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 GPR37L1O60883 481 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 BPGMP07738 259 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 VCLP18206 1134 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 KCNC1P48547 511 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 GYS2P54840 703 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 NFKB2Q00653 900 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 SP140Q13342 867 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 ZYG11AQ6WRX3 759 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 LILRA3Q8N6C8 439 aaPredicted RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 ZBTB44Q8NCP5 570 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 ASB11Q8WXH4 323 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 ZC3H10Q96K80 434 aaKnown RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 SCYL1Q96KG9 808 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 OR2M4Q96R27 311 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 UNKQ9C0B0 810 aaKnown RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 OR52A5Q9H2C5 316 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 RDH14Q9HBH5 336 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 MLXIPLQ9NP71 852 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 MRPL40Q9NQ50 206 aaKnown RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 AASDHPPTQ9NRN7 309 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 TRNAU1APQ9NX07 287 aaKnown RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 ACSL5Q9ULC5 683 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 PNMA8BQ9ULN7 279 aaPredicted RBP18.88■□□□□ 0.61
RPS28-202ENST00000449223 PRKAB1Q9Y478 270 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 GON4LQ3T8J9 2241 aa18.88■□□□□ 0.61
RPS28-202ENST00000449223 SYCE1LA8MT33 242 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 SLC16A5O15375 505 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 WNT1P04628 370 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 C8GP07360 202 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 MTHFD2P13995 350 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 CPA3P15088 417 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 NUBP1P53384 320 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 SRP54P61011 504 aaKnown RBP18.87■□□□□ 0.61
RPS28-202ENST00000449223 GUCY1A3Q02108 690 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 FZD2Q14332 565 aa18.87■□□□□ 0.61
RPS28-202ENST00000449223 NFE2L1Q14494 772 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms