RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TM7SF2O76062 418 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 APODP05090 189 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 C8GP07360 202 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 UROSP10746 265 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 BMP1P13497 986 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 NCF1P14598 390 aaPredicted RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 PIK3R1P27986 724 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 GJA4P35212 333 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CA5AP35218 305 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 OPRD1P41143 372 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 GRIA2P42262 883 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 MAPK9P45984 424 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CPA2P48052 419 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 PIK3CGP48736 1102 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ATP4BP51164 291 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 RAP1GDS1P52306 607 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 HK3P52790 923 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 STX1BP61266 288 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CDKL1Q00532 357 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 SP140Q13342 867 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ADAM15Q13444 863 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CYLC2Q14093 348 aaPredicted RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ACOX1Q15067 660 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 RBBP7Q16576 425 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ITPRIPL2Q3MIP1 535 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ACSBG2Q5FVE4 666 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 FAM46CQ5VWP2 391 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 Q6ZVL8 140 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 NEK10Q6ZWH5 1172 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 RPS27LQ71UM5 84 aaKnown RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 MTSS1LQ765P7 747 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 TECPR1Q7Z6L1 1165 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 RGL4Q8IZJ4 473 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 PELI3Q8N2H9 469 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 TCAIMQ8N3R3 496 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF511Q8NB15 262 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 LKAAEAR1Q8TD35 194 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 TWIST2Q8WVJ9 160 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 BTN2A2Q8WVV5 523 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 FOXJ1Q92949 421 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CATSPER2Q96P56 530 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF382Q96SR6 550 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ZCCHC2Q9C0B9 1178 aaKnown RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 MTG2Q9H4K7 406 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 ZBTB26Q9HCK0 441 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 THAP10Q9P2Z0 257 aaPredicted RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CD84Q9UIB8 345 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 OTOL1A6NHN0 477 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 RFXAPO00287 272 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 E2F3O00716 465 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC16A5O15375 505 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 LINC01565O15544 149 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 NUAK1O60285 661 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 KAT7O95251 611 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 RECKO95980 971 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 JUNP05412 331 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 ANXA5P08758 320 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 LAMP2P13473 410 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 CCND1P24385 295 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 AOAHP28039 575 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 ETV3P41162 512 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 B4GALNT1Q00973 533 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 PPP1R3AQ16821 1122 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 UGT3A2Q3SY77 523 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 LINC01559Q495D7 138 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 C16orf89Q6UX73 402 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 GPRIN3Q6ZVF9 776 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 SPNS2Q8IVW8 549 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF366Q8N895 744 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 CFAP61Q8NHU2 1237 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 UBTD2Q8WUN7 234 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 AP2M1Q96CW1 435 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 LENG8Q96PV6 779 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 EGFL8Q99944 293 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 RIOK2Q9BVS4 552 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 TRMT61BQ9BVS5 477 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 SEMA4BQ9NPR2 832 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 UTP6Q9NYH9 597 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 PTBP2Q9UKA9 531 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 COL4A3Q01955 1670 aa10.39□□□□□ -0.75
VIPAS39-203ENST00000448935 LRRC14BA6NHZ5 514 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 OTCP00480 354 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HIST1H2AGP0C0S8 130 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HLA-EP13747 358 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 TSPAN8P19075 237 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HIST1H2ADP20671 130 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 GDI1P31150 447 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 CCR7P32248 378 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 BMP8BP34820 402 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 STX5Q13190 355 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 CUL3Q13618 768 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 GRM2Q14416 872 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 GBX1Q14549 363 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms