RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ASCC3Q8N3C0 2202 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 EP300Q09472 2414 aaPredicted RBP17.64■□□□□ 0.42
TRAPPC4-203ENST00000447216 IQANK1A0A1B0GTG1 560 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 C17orf113A0A1B0GUU1 675 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLC5A10A0PJK1 596 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 LNP1A1A4G5 178 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 PRR19A6NJB7 356 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 TPP1O14773 563 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 AQP9O43315 295 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 CDH16O75309 829 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 KRT37O76014 449 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 CER1O95813 267 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 ALDOAP04075 364 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 GSTM1P09488 218 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 VCLP18206 1134 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 CNTFP26441 200 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 PDHA2P29803 388 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 ARRB1P49407 418 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 SERPINB8P50452 374 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 GSTM4Q03013 218 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 DMPKQ09013 629 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 HSPA14Q0VDF9 509 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 ILF2Q12905 390 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 PDAP1Q13442 181 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 ACSBG2Q5FVE4 666 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 PAQR3Q6TCH7 311 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 TMEM207Q6UWW9 146 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 GATAD2AQ86YP4 633 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 CPNE9Q8IYJ1 553 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 MINDY1Q8N5J2 469 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 MZB1Q8WU39 189 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 INPP5DQ92835 1189 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 TSPAN17Q96FV3 270 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 GSDMCQ9BYG8 508 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 LATS2Q9NRM7 1088 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 SNX15Q9NRS6 342 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 SEMA4GQ9NTN9 838 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 ZNF446Q9NWS9 450 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 PSMD13Q9UNM6 376 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 CDYLQ9Y232 598 aa17.64■□□□□ 0.41
TRAPPC4-203ENST00000447216 LIN7AO14910 233 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 GPC4O75487 556 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 EML2O95834 649 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 APOA4P06727 396 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 STMN1P16949 149 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 DGKAP23743 735 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 RPL10P27635 214 aaKnown RBP17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 EPHA8P29322 1005 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 RAB10P61026 200 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 NHLH1Q02575 133 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 LRP8Q14114 963 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 ELOCQ15369 112 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 PLEKHS1Q5SXH7 462 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 LGSNQ5TDP6 509 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 METRNLQ641Q3 311 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 UGT3A1Q6NUS8 523 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 FSTL5Q8N475 847 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 PRDM8Q9NQV8 689 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 TAAR2Q9P1P5 351 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 TBC1D29Q9UFV1 150 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 LGALS13Q9UHV8 139 aa17.63■□□□□ 0.41
TRAPPC4-203ENST00000447216 A0A1W2PPM1 405 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 PDZK1P1A8MUH7 402 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 PROB1E7EW31 1015 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 KPNA5O15131 536 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 FFAR2O15552 330 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 KCNJ13O60928 360 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 SASH3O75995 380 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 CD9P21926 228 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 IDSP22304 550 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 TYK2P29597 1187 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 SKIV2L2P42285 1042 aaKnown RBP17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 CCT8P50990 548 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 CLCNKAP51800 687 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 ATXN3P54252 364 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 GBX1Q14549 363 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RASA2Q15283 850 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 ZKSCAN8Q15776 578 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 DEFB133Q30KQ1 61 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 PPM1JQ5JR12 505 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RAPH1Q70E73 1250 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 SFTPA2Q8IWL1 248 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLC25A45Q8N413 288 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RIBC1Q8N443 379 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 EEF1AKMT1Q8WVE0 214 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 ANKRD49Q8WVL7 239 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 ASZ1Q8WWH4 475 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 TMEM159Q96B96 161 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RMDN2Q96LZ7 410 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RUFY1Q96T51 708 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 WWP1Q9H0M0 922 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 CENPHQ9H3R5 247 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 GPAMQ9HCL2 828 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 RXFP3Q9NSD7 469 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 DOLKQ9UPQ8 538 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 WDR37Q9Y2I8 494 aa17.62■□□□□ 0.41
TRAPPC4-203ENST00000447216 TRBV23OR9-2A0A075B6M9 112 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 KLHL33A6NCF5 533 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 YY2O15391 372 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms