RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 RHBDF1Q96CC6 855 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 NSUN3Q9H649 340 aaKnown RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 TSR3Q9UJK0 312 aaKnown RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 ADAMTS6Q9UKP5 1117 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 CDH7Q9ULB5 785 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 POMPQ9Y244 141 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 BTRCQ9Y297 605 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PRRT4C9JH25 899 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 K7EPI3 171 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 KATNA1O75449 491 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 GUCA1CO95843 209 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 ALDOCP09972 364 aaKnown RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 HIST1H2AGP0C0S8 130 aaPredicted RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 HIST1H2ADP20671 130 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 GPX3P22352 226 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 ARL1P40616 181 aaPredicted RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 ETV3P41162 512 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 EIF2DP41214 584 aaKnown RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 MAPK9P45984 424 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 ICE2Q659A1 982 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 NUDT18Q6ZVK8 323 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 YAF2Q8IY57 180 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 BTN2A2Q8WVV5 523 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 ASZ1Q8WWH4 475 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 NXPE3Q969Y0 559 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 MRPL38Q96DV4 380 aaKnown RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 ZFYVE19Q96K21 471 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 HIST1H2AHQ96KK5 128 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 HIST1H2AJQ99878 128 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 H2AFJQ9BTM1 129 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 RIOK2Q9BVS4 552 aaKnown RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 TMPRSS11EQ9UL52 423 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 TIMM22Q9Y584 194 aa15.4■□□□□ 0.06
SNX13-204ENST00000444712 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
SNX13-204ENST00000444712 WNT9AO14904 365 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 NRP2O60462 931 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PDE5AO76074 875 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 CYP2A7P20853 494 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 FCARP24071 287 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PRDX3P30048 256 aaKnown RBP15.39■□□□□ 0.05
SNX13-204ENST00000444712 HMOX2P30519 316 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SLC6A11P48066 632 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 HSPA7P48741 367 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 HNMTP50135 292 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 FCHO2Q0JRZ9 810 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ACOX1Q15067 660 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 REP15Q6BDI9 236 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ZNF765Q7L2R6 523 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PIP4K2CQ8TBX8 421 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 METTL6Q8TCB7 284 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SCAMP4Q969E2 229 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ESAMQ96AP7 390 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ROPN1LQ96C74 230 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SLC12A9Q9BXP2 914 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 MTG2Q9H4K7 406 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 IPPKQ9H8X2 491 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SLC28A3Q9HAS3 691 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PARVBQ9HBI1 364 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 HPS4Q9NQG7 708 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 DYRK4Q9NR20 520 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SDR39U1Q9NRG7 319 aaPredicted RBP15.39■□□□□ 0.05
SNX13-204ENST00000444712 SUN2Q9UH99 717 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ZNF225Q9UK10 706 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SARDHQ9UL12 918 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 NDUFAF1Q9Y375 327 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 LRRK1Q38SD2 2015 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 C1QTNF3-AMACRE9PGA6 284 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 TAPBPO15533 448 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 WDR47O94967 919 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 VHLP40337 213 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PTDSS1P48651 473 aaKnown RBP15.39■□□□□ 0.05
SNX13-204ENST00000444712 RPIAP49247 311 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 AP1S2P56377 157 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ERVPABLB-1P60509 514 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ERVK-8P63133 956 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PHKG1Q16816 387 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ATP6AP1LQ52LC2 224 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PIGGQ5H8A4 983 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 COQ5Q5HYK3 327 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 C9orf64Q5T6V5 341 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 FBXL19Q6PCT2 694 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 SERPINA13PQ6UXR4 307 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 UBE2R2Q712K3 238 aaPredicted RBP15.39■□□□□ 0.05
SNX13-204ENST00000444712 LRRC70Q7Z2Q7 622 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 MILR1Q7Z6M3 343 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 HPS6Q86YV9 775 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ZNF366Q8N895 744 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 CDYL2Q8N8U2 506 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 PPFIBP2Q8ND30 876 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 OR4F6Q8NGB9 312 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 OR52B6Q8NGF0 335 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 HMGCLL1Q8TB92 370 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 GLYATL1Q969I3 302 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 AP2M1Q96CW1 435 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 CDRT15Q96T59 188 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 NPAS2Q99743 824 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 NTMT1Q9BV86 223 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 ZCCHC2Q9C0B9 1178 aaKnown RBP15.39■□□□□ 0.05
SNX13-204ENST00000444712 ABCG8Q9H221 673 aa15.39■□□□□ 0.05
SNX13-204ENST00000444712 IGFLR1Q9H665 355 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms