RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PPP1R36Q96LQ0 422 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PPP3R2Q96LZ3 170 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 FAM161BQ96MY7 647 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 GAS2L1Q99501 681 aaPredicted RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 SLC30A3Q99726 388 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 S1PR5Q9H228 398 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 TMEM45AQ9NWC5 275 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CACNA2D2Q9NY47 1150 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 POLG2Q9UHN1 485 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 SCML1Q9UN30 329 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CHUKO15111 745 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 MGRN1O60291 552 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 TM7SF2O76062 418 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 GUCA1CO95843 209 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 RPN2P04844 631 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 C6P13671 934 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 HGFP14210 728 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 IDO1P14902 403 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CCND1P24385 295 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 NTSR1P30989 418 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CCR10P46092 362 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 KCNC1P48547 511 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 RPIAP49247 311 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PNLIPRP1P54315 467 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 DPTQ07507 201 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 GRSF1Q12849 480 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS50-205ENST00000441602 SGCGQ13326 291 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CST6Q15828 149 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 IMPG1Q17R60 797 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 HSF5Q4G112 596 aaPredicted RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 BCL7AQ4VC05 210 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 FBXW10Q5XX13 1052 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PARM1Q6UWI2 310 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 RALGPS2Q86X27 583 aaPredicted RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 TREML1Q86YW5 311 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 MIER2Q8N344 545 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PHTF2Q8N3S3 785 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 LKAAEAR1Q8TD35 194 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 MYLIPQ8WY64 445 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 DNASE1L2Q92874 299 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 FAM129BQ96TA1 746 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 SLC12A9Q9BXP2 914 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 CD244Q9BZW8 370 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 ZDHHC4Q9NPG8 344 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PHPT1Q9NRX4 125 aaPredicted RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 DNAJC11Q9NVH1 559 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 TAS2R1Q9NYW7 299 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 GALPQ9UBC7 116 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 TRPS1Q9UHF7 1281 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 PTBP2Q9UKA9 531 aaKnown RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 MTF2Q9Y483 593 aaPredicted RBP5.92□□□□□ -1.46
VPS50-205ENST00000441602 NOTCH4Q99466 2003 aa5.92□□□□□ -1.46
VPS50-205ENST00000441602 DYTNA2CJ06 578 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RGS14O43566 566 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 MMP20O60882 483 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ATP6V1G2O95670 118 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 DRD1P21728 446 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 IGFBP4P22692 258 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TEAD1P28347 426 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 PRLHRP49683 370 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TMEM115Q12893 351 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 GRIK2Q13002 908 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CAMK2GQ13555 558 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 AGKQ53H12 422 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 PRMT9Q6P2P2 845 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TMEM220Q6QAJ8 160 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SBSNQ6UWP8 590 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RINLQ6ZS11 566 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GOLGA7Q7Z5G4 137 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 NET1Q7Z628 596 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 TRAPPC5Q8IUR0 188 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 HDDC3Q8N4P3 179 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RAB42Q8N4Z0 105 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RBM15BQ8NDT2 890 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 PHC3Q8NDX5 983 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 HM13Q8TCT9 377 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 THTPAQ9BU02 230 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RSPH9Q9H1X1 276 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 ACTR8Q9H981 624 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TRIM39Q9HCM9 518 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 FADS3Q9Y5Q0 445 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ZNF839A8K0R7 811 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TMEM233B4DJY2 109 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 PIP5K1BO14986 540 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 INPP4BO15327 924 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GPR39O43194 453 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SNRPB2P08579 225 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 EBLN1P0CF75 366 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TSPAN8P19075 237 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 MAPK1P28482 360 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CCR7P32248 378 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 HSPA7P48741 367 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ACADVLP49748 655 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RAP1GDS1P52306 607 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 MRPS21P82921 87 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 CNTN1Q12860 1018 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 HTR4Q13639 388 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SMU1Q2TAY7 513 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 FBXO43Q4G163 708 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms