RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SLCO3A1Q9UIG8 710 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 INTS6Q9UL03 887 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 LOC100130705A0A1B0GUX0 176 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 TAF4O00268 1085 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 FYNP06241 537 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ALDH4A1P30038 563 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 RYKP34925 604 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 GATMP50440 423 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 DIO3P55073 304 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 FOXA1P55317 472 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 VAC14Q08AM6 782 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 DSC3Q14574 896 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ZNF789Q5FWF6 425 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.74□□□□□ -0.53
LTBR-203ENST00000441074 HECTD2Q5U5R9 776 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ZNF691Q5VV52 312 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 HFE2Q6ZVN8 426 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 SVOPLQ8N434 492 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.74□□□□□ -0.53
LTBR-203ENST00000441074 POC5Q8NA72 575 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ITFG1Q8TB96 612 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 FCRL5Q96RD9 977 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 RBM4BQ9BQ04 359 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 FICDQ9BVA6 458 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 RBM4Q9BWF3 364 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 EMILIN2Q9BXX0 1053 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 CRTAC1Q9NQ79 661 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 DDIT4Q9NX09 232 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 DNAJB9Q9UBS3 223 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 MN1Q10571 1320 aaPredicted RBP11.73□□□□□ -0.53
LTBR-203ENST00000441074 FAM92AA1XBS5 289 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 A6NL46 340 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 SYCE1LA8MT33 242 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 SCO2O43819 266 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 WISP3O95389 354 aaPredicted RBP11.73□□□□□ -0.53
LTBR-203ENST00000441074 DLGAP3O95886 979 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PTTG1O95997 202 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 C1RP00736 705 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 ANXA6P08133 673 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 LINC00032P0C843 101 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PCNAP12004 261 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 CXCR2P25025 360 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PBX3P40426 434 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
LTBR-203ENST00000441074 GEMP55040 296 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 COPZ1P61923 177 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 IL18R1Q13478 541 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 TCTN1Q2MV58 587 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 SYT6Q5T7P8 510 aaPredicted RBP11.73□□□□□ -0.53
LTBR-203ENST00000441074 HID1Q8IV36 788 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 IPMKQ8NFU5 416 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 SCLYQ96I15 445 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 TEX37Q96LM6 180 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 COLEC11Q9BWP8 271 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PRKD2Q9BZL6 878 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PIF1Q9H611 641 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 AIG1Q9NVV5 245 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 SLAMF8Q9P0V8 285 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 OSGIN1Q9UJX0 560 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 EIF3LQ9Y262 564 aaKnown RBP11.73□□□□□ -0.53
LTBR-203ENST00000441074 FRMPD3Q5JV73 1810 aa11.73□□□□□ -0.53
LTBR-203ENST00000441074 PPP6CO00743 305 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 KMOO15229 486 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 IDH3BO43837 385 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 MAN1A2O60476 641 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 CYBBP04839 570 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CCNCP24863 283 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CYP2C18P33260 490 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CXCR3P49682 368 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CDK5R2Q13319 367 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 GPNMBQ14956 572 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 FAM209AQ5JX71 171 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PM20D1Q6GTS8 502 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PRR23BQ6ZRT6 265 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 RAB44Q7Z6P3 723 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 DTWD1Q8N5C7 304 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 MCOLN3Q8TDD5 553 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 B3GALT6Q96L58 329 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 UGT2B28Q9BY64 529 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 SMOC2Q9H3U7 446 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 WDCPQ9H6R7 721 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 ENTPD7Q9NQZ7 604 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 INTS7Q9NVH2 962 aaKnown RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 OR12D3Q9UGF7 316 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 YJEFN3A6XGL0 299 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms