RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ITPKBP27987 946 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 NMBRP28336 390 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 SLC5A2P31639 672 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 MAPK10P53779 464 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 SARNPP82979 210 aaKnown RBP23.12■■□□□ 1.29
VARS-217ENST00000440048 AGBL5Q8NDL9 886 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 GRK7Q8WTQ7 553 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 RMDN2Q96LZ7 410 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 NAPGQ99747 312 aaPredicted RBP23.12■■□□□ 1.29
VARS-217ENST00000440048 COG4Q9H9E3 785 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 A8MU76 341 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 TMEM63AO94886 807 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 CSTF2P33240 577 aaKnown RBP eCLIP23.11■■□□□ 1.29
VARS-217ENST00000440048 ABCG1P45844 678 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 SEMA3AQ14563 771 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 FASTKD1Q53R41 847 aaKnown RBP23.11■■□□□ 1.29
VARS-217ENST00000440048 CAPRIN2Q6IMN6 1127 aaKnown RBP23.11■■□□□ 1.29
VARS-217ENST00000440048 DUS1LQ6P1R4 473 aaKnown RBP23.11■■□□□ 1.29
VARS-217ENST00000440048 CERS6Q6ZMG9 384 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 ARHGAP22Q7Z5H3 698 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 PLXDC1Q8IUK5 500 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 USP7Q93009 1102 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 TTC1Q99614 292 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 KIFC1Q9BW19 673 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 MRM3Q9HC36 420 aaKnown RBP23.11■■□□□ 1.29
VARS-217ENST00000440048 KLHL3Q9UH77 587 aa23.11■■□□□ 1.29
VARS-217ENST00000440048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.11■■□□□ 1.292e-13■■■□□ 16.4
VARS-217ENST00000440048 ATRXP46100 2492 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 MN1Q10571 1320 aaPredicted RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 NVLO15381 856 aaKnown RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 OR1I1O60431 355 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 AVILO75366 819 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 GSTM1P09488 218 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 FGF3P11487 239 aaPredicted RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 GFERP55789 205 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 GSTM4Q03013 218 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 PDZD3Q86UT5 571 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 CAND1Q86VP6 1230 aaKnown RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 SPACA3Q8IXA5 215 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 KCNE4Q8WWG9 221 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 JPH3Q8WXH2 748 aaPredicted RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 RSC1A1Q92681 617 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 CAPZA3Q96KX2 299 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 DDX47Q9H0S4 455 aaKnown RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 CATSPERZQ9NTU4 200 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 MARCH4Q9P2E8 410 aaPredicted RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 RALYQ9UKM9 306 aaKnown RBP23.1■■□□□ 1.29
VARS-217ENST00000440048 SOX13Q9UN79 622 aa23.1■■□□□ 1.29
VARS-217ENST00000440048 QSOX1O00391 747 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 C9P02748 559 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 CAPZBP47756 277 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 CES3Q6UWW8 571 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 LDB1Q86U70 411 aaPredicted RBP23.09■■□□□ 1.29
VARS-217ENST00000440048 CREG2Q8IUH2 290 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 MCUQ8NE86 351 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 MFSD3Q96ES6 412 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 OR52A5Q9H2C5 316 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 OCIAD1Q9NX40 245 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 SAR1BQ9Y6B6 198 aa23.09■■□□□ 1.29
VARS-217ENST00000440048 CTAGE9A4FU28 777 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 C9orf172C9J069 976 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 CD3EAPO15446 510 aaKnown RBP23.08■■□□□ 1.29
VARS-217ENST00000440048 CAPN5O15484 640 aaPredicted RBP23.08■■□□□ 1.29
VARS-217ENST00000440048 PRAMEF10O60809 474 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 FTH1P02794 183 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 OR56A5P0C7T3 313 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 PDHA2P29803 388 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 PREPP48147 710 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 RPA4Q13156 261 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 PPP1R7Q15435 360 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 MPP5Q8N3R9 675 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 ZFPM2Q8WW38 1151 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 C9orf72Q96LT7 481 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 TGM7Q96PF1 710 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 ANAPC5Q9UJX4 755 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 ACSL6Q9UKU0 697 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 HEBP2Q9Y5Z4 205 aa23.08■■□□□ 1.29
VARS-217ENST00000440048 EFCAB7A8K855 629 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 GOLGA8MH3BSY2 632 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 FANCGO15287 622 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 MLNP12872 115 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 PPARGP37231 505 aaPredicted RBP23.07■■□□□ 1.28
VARS-217ENST00000440048 LEPRP48357 1165 aaKnown RBP23.07■■□□□ 1.28
VARS-217ENST00000440048 TLE3Q04726 772 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 PLCL1Q15111 1095 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 AARS2Q5JTZ9 985 aaKnown RBP23.07■■□□□ 1.28
VARS-217ENST00000440048 ZNF449Q6P9G9 518 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 FAM129CQ86XR2 697 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 ELMO1Q92556 727 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 TAAR9Q96RI9 348 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 DPH1Q9BZG8 443 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 B3GNT4Q9C0J1 378 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 KIR3DX1Q9H7L2 352 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 XAB2Q9HCS7 855 aaKnown RBP23.07■■□□□ 1.28
VARS-217ENST00000440048 FOXJ2Q9P0K8 574 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 EPHA6Q9UF33 1036 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 PCYOX1Q9UHG3 505 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 SLC24A2Q9UI40 661 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 COLEC10Q9Y6Z7 277 aa23.07■■□□□ 1.28
VARS-217ENST00000440048 LIN7AO14910 233 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms