RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 KLHL1Q9NR64 748 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 DHCR7Q9UBM7 475 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 PSMD11O00231 422 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 GLI1P08151 1106 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 ZFP36L2P47974 494 aaKnown RBP10.68□□□□□ -0.7
RTN4-211ENST00000438462 LMAN1P49257 510 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 MXI1P50539 228 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 NR1H2P55055 460 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 BCL2L1Q07817 233 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 NKAIN1Q4KMZ8 207 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 DENND1BQ6P3S1 775 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 SHISA6Q6ZSJ9 500 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 ACAD11Q709F0 780 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 TSPAN33Q86UF1 283 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 OR10Q1Q8NGQ4 319 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 ZFPM2Q8WW38 1151 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 VPS50Q96JG6 964 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 LLPHQ9BRT6 129 aaKnown RBP10.68□□□□□ -0.7
RTN4-211ENST00000438462 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 TAS2R14Q9NYV8 317 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 MKL2Q9ULH7 1088 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
RTN4-211ENST00000438462 A0A1B0GTH9 108 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 RNF223E7ERA6 249 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 RNF225M0QZC1 329 aaPredicted RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 DAB1O75553 588 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 STATHP02808 62 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 MSL3P1P0C860 447 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 GTF2H1P32780 548 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 THBS2P35442 1172 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 SULT1E1P49888 294 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 DRG2P55039 364 aaKnown RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 TNK1Q13470 666 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 CAPRIN1Q14444 709 aaKnown RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 INSCQ1MX18 579 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 ACBD5Q5T8D3 534 aaPredicted RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 RWDD4Q6NW29 188 aaKnown RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 INTS8Q75QN2 995 aaKnown RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 WDR53Q7Z5U6 358 aaPredicted RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 TMEM110Q86TL2 294 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 OOSP2Q86WS3 158 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 GPR135Q8IZ08 494 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 CARFQ8N187 725 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 TMEM174Q8WUU8 243 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 SIGLEC12Q96PQ1 595 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 SPSB2Q99619 263 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 CCL19Q99731 98 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
RTN4-211ENST00000438462 SLC22A11Q9NSA0 550 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 TMEM248Q9NWD8 314 aa10.67□□□□□ -0.7
RTN4-211ENST00000438462 NPIPB15A6NHN6 443 aaPredicted RBP10.66□□□□□ -0.7
RTN4-211ENST00000438462 USP27XA6NNY8 438 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 CES2O00748 559 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 TRAFD1O14545 582 aaPredicted RBP10.66□□□□□ -0.7
RTN4-211ENST00000438462 HRGP04196 525 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 PGRP06401 933 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 CELA2AP08217 269 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 KRT13P13646 458 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 ZNF24P17028 368 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 CDH3P22223 829 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 FDXRP22570 491 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 EEF1DP29692 281 aaKnown RBP10.66□□□□□ -0.7
RTN4-211ENST00000438462 PTPRRQ15256 657 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 SLC25A35Q3KQZ1 300 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 CRTC3Q6UUV7 619 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 NEK10Q6ZWH5 1172 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 SRLQ86TD4 932 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 OR5M3Q8NGP4 307 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 STK32AQ8WU08 396 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 NPY6RQ99463 290 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 TNMDQ9H2S6 317 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 ASNSD1Q9NWL6 643 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 UBA2Q9UBT2 640 aaPredicted RBP10.66□□□□□ -0.7
RTN4-211ENST00000438462 TRIM10Q9UDY6 481 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 SLC23A2Q9UGH3 650 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
RTN4-211ENST00000438462 MPDZO75970 2070 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 MAP2K7O14733 419 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 VEGFDO43915 354 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 NUAK1O60285 661 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 BMP10O95393 424 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 BMP15O95972 392 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 PYGLP06737 847 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 EPXP11678 715 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 ACPPP15309 386 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 RHOQP17081 205 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 PTH2RP49190 550 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 DEUP1Q05D60 604 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 ZNF33BQ06732 778 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 PDCLQ13371 301 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 TDRD12Q587J7 1177 aaKnown RBP10.65□□□□□ -0.7
RTN4-211ENST00000438462 ABHD17BQ5VST6 288 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms