RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TNFP01375 233 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 WASP42768 502 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 PTPN5P54829 565 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 OSER1Q9NX31 292 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 RAB26Q9ULW5 256 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 FAM92AA1XBS5 289 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 IDH3BO43837 385 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 CBSLP0DN79 551 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 CBSP35520 551 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 SRP54P61011 504 aaKnown RBP15.66■□□□□ 0.1
PTPN13-204ENST00000436978 TBATAQ96M53 351 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 FGFBP2Q9BYJ0 223 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 RAPGEFL1Q9UHV5 662 aa15.66■□□□□ 0.1
PTPN13-204ENST00000436978 PDPK1O15530 556 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ADARP55265 1226 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 HM13Q8TCT9 377 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ZNF347Q96SE7 839 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CDK5RAP2Q96SN8 1893 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 WNT9AO14904 365 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 PRSS55Q6UWB4 352 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 C2orf73Q8N5S3 287 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SIDT2Q8NBJ9 832 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 GPER1Q99527 375 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 NOL6Q9H6R4 1146 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 TLX3O43711 291 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SRPRAP08240 638 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 COL6A1P12109 1028 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 LMO2P25791 158 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CSKP41240 450 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 VBP1P61758 197 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 GHRHRQ02643 423 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ZNF846Q147U1 533 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ZBTB6Q15916 424 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 DPY19L1Q2PZI1 675 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 GDPD4Q6W3E5 623 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 HID1Q8IV36 788 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 NLGN2Q8NFZ4 835 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 TAPBPLQ9BX59 468 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 DNAAF2Q9NVR5 837 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 LRRC32Q14392 662 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SNAPC1Q16533 368 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ANKRD36CQ5JPF3 1778 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 MAGEB17A8MXT2 336 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 PSMD11O00231 422 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 GPIP06744 558 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 RPL5P46777 297 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SH3D19Q5HYK7 790 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 NETO2Q8NC67 525 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 VANGL1Q8TAA9 524 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 NOCTQ9UK39 431 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 FBXW2Q9UKT8 454 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SCML2Q9UQR0 700 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CASRP41180 1078 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CCR10P46092 362 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CRYBG1Q9Y4K1 1723 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 TNFRSF11BO00300 401 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 KCNA5P22460 613 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 MINDY4Q4G0A6 757 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 GLYATQ6IB77 296 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 TSTD1Q8NFU3 115 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 TSEN15Q8WW01 171 aaKnown RBP15.65■□□□□ 0.1
PTPN13-204ENST00000436978 XAGE5Q8WWM1 108 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 CDH22Q9UJ99 828 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 ING4Q9UNL4 249 aa15.65■□□□□ 0.1
PTPN13-204ENST00000436978 PAPSS2O95340 614 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 NRG3P56975 720 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 RAB2AP61019 212 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 GPR33Q49SQ1 333 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 IL23RQ5VWK5 629 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 KIAA0930Q6ICG6 404 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PQLC1Q8N2U9 271 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 EFHD2Q96C19 240 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 GPATCH1Q9BRR8 931 aaKnown RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 CERS4Q9HA82 394 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 DMTF1Q9Y222 760 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 RUVBL1Q9Y265 456 aaKnown RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 AGR2O95994 175 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PIGRP01833 764 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 RB1P06400 928 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 SDC2P34741 201 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 CBX5P45973 191 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 CHIT1Q13231 466 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PDGFRLQ15198 375 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 EOGTQ5NDL2 527 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 HAVCR1Q96D42 359 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-204ENST00000436978 SCELO95171 688 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PLEKHG4BQ96PX9 1271 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 FAM155BO75949 473 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 SLC1A5Q15758 541 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PLEKHG4Q58EX7 1191 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 COX18Q8N8Q8 333 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 CLPTM1LQ96KA5 538 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PPM1MQ96MI6 270 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 PLEKHA1Q9HB21 404 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 ANKRD12Q6UB98 2062 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 A0A1W2PQ72 361 aa15.64■□□□□ 0.09
PTPN13-204ENST00000436978 ILVBLA1L0T0 632 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms