RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 NDUFA13Q9P0J0 144 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SEC14L3Q9UDX4 400 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CIDEBQ9UHD4 219 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ADAMTS5Q9UNA0 930 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SAMD4AQ9UPU9 718 aaKnown RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 LIN7AO14910 233 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PRKCGP05129 697 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF8P17098 575 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 NCBP2-AS2Q69YL0 99 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 MRPL10Q7Z7H8 261 aaKnown RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 NATD1Q8N6N6 113 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 Q8N9G6 341 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 MS4A4AQ96JQ5 239 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 EFCAB11Q9BUY7 163 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 DDX28Q9NUL7 540 aaKnown RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SERPINA6P08185 405 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CFHP08603 1231 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 GSSP48637 474 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PRAMEF13Q5VWM6 474 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CYP2U1Q7Z449 544 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SMPDL3AQ92484 453 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CENPIQ92674 756 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 TWNKQ96RR1 684 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 MAGEL2Q9UJ55 1249 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PIAS3Q9Y6X2 628 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 TLX3O43711 291 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PRAMEF11O60813 436 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SOCS5O75159 536 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SIN3BO75182 1162 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SERPINB1P30740 379 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 GJA5P36382 358 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 KHKP50053 298 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF805Q5CZA5 627 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 LYSMD3Q7Z3D4 306 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 BHLHE22Q8NFJ8 381 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 PWWP2AQ96N64 755 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CYP2S1Q96SQ9 504 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 HOPXQ9BPY8 73 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CCDC28BQ9BUN5 200 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 TFB2MQ9H5Q4 396 aaKnown RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 RUVBL1Q9Y265 456 aaKnown RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CLCA3PQ9Y6N3 262 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 DNAJC25-GNG10A0A024R161 153 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 HLA-EP13747 358 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 DPP6P42658 865 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SLC10A7Q0GE19 358 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CHRNA6Q15825 494 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 DGKKQ5KSL6 1271 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 OLFML1Q6UWY5 402 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SLC36A4Q6YBV0 504 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 LIX1Q8N485 282 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 MTERF3Q96E29 417 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 DGAT2Q96PD7 388 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CCDC162PA2VCL2 907 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 CCL22O00626 93 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 POP7O75817 140 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 OC90Q02509 493 aaPredicted RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 HFE2Q6ZVN8 426 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 SLC29A4Q7RTT9 530 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 DCAKDQ8WVC6 231 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 XAGE5Q8WWM1 108 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 ZDHHC12Q96GR4 267 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 VRTNQ9H8Y1 702 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 OR5K4A6NMS3 321 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 RNF225M0QZC1 329 aaPredicted RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 TGM5O43548 720 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 KAT7O95251 611 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 ATP6V1B1P15313 513 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PTPN5P54829 565 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 AP1S2P56377 157 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 ARHGAP40Q5TG30 622 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 RNF148Q8N7C7 305 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 GDPD5Q8WTR4 605 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PTPN18Q99952 460 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 IRGMA1A4Y4 181 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PDPK1O15530 556 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 KERAO60938 352 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 AP2A2O94973 939 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 MYBPC1Q00872 1141 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PTGES3Q15185 160 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 RPTNQ6XPR3 784 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PNO1Q9NRX1 252 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 COPG2Q9UBF2 871 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PLLPQ9Y342 182 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 FAM86C2PA6NEL3 165 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 SMNDC1O75940 238 aaKnown RBP eCLIP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 PGDP52209 483 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 POLR2JP52435 117 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 ARMCX4Q5H9R4 360 aa15.39■□□□□ 0.05
NEDD4-202ENST00000435532 RANBP3LQ86VV4 465 aaPredicted RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 TSEN2Q8NCE0 465 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 RNASE11Q8TAA1 199 aaKnown RBP15.39■□□□□ 0.05
NEDD4-202ENST00000435532 FAM3CQ92520 227 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms