RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SPATA13Q96N96 652 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 PANX2Q96RD6 677 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 TBL1YQ9BQ87 522 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 EPN3Q9H201 632 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 RARRES3Q9UL19 164 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 EFR3BQ9Y2G0 817 aa16.68■□□□□ 0.26
TRIM39-209ENST00000428728 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CRTAMO95727 393 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 FURINP09958 794 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CCNYL3P0C7X3 344 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ITGALP20701 1170 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CETN2P41208 172 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ZNF75DP51815 510 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ZNF140P52738 457 aaPredicted RBP16.67■□□□□ 0.26
TRIM39-209ENST00000428728 XIAPP98170 497 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 SEPT6Q14141 434 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 GSE1Q14687 1217 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 BCL7AQ4VC05 210 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CRTC2Q53ET0 693 aaPredicted RBP16.67■□□□□ 0.26
TRIM39-209ENST00000428728 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 PWWP2BQ6NUJ5 590 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ARMC6Q6NXE6 501 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 TMEM135Q86UB9 458 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CT55Q8WUE5 264 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ABHD17AQ96GS6 310 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CD180Q99467 661 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 KIR3DX1Q9H7L2 352 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 FGF21Q9NSA1 209 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 HRASLS2Q9NWW9 162 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 SEMA5BQ9P283 1151 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 SLC24A2Q9UI40 661 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 ACSL5Q9ULC5 683 aa16.67■□□□□ 0.26
TRIM39-209ENST00000428728 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
TRIM39-209ENST00000428728 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
TRIM39-209ENST00000428728 CDC14CA4D256 554 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 GRID2IPA4D2P6 1211 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 OR6C74A6NCV1 312 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 SGTAO43765 313 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 TJP3O95049 919 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PTMAP06454 111 aaKnown RBP16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PYGMP11217 842 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 RALBP11234 206 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 NR1D1P20393 614 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PRLHRP49683 370 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PDE1BQ01064 536 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 ACY1Q03154 408 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 KRT33BQ14525 404 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 LACTB2Q53H82 288 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-209ENST00000428728 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 RAD9BQ6WBX8 426 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 TMTC1Q8IUR5 882 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 CFAP206Q8IYR0 622 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 NXPE1Q8N323 547 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 HM13Q8TCT9 377 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 ULK4Q96C45 1275 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 DNAJC1Q96KC8 554 aaKnown RBP16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PPM1MQ96MI6 270 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 TWSG1Q9GZX9 223 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 LHX9Q9NQ69 397 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 SOHLH2Q9NX45 425 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 KCND3Q9UK17 655 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 PADI1Q9ULC6 663 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 POLHQ9Y253 713 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 KCNMB2Q9Y691 235 aa16.66■□□□□ 0.26
TRIM39-209ENST00000428728 KLHL33A6NCF5 533 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 DDX3YO15523 660 aaKnown RBP16.65■□□□□ 0.26
TRIM39-209ENST00000428728 MT-ND3P03897 115 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 NTRK1P04629 796 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 HADHAP40939 763 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 KPNA2P52292 529 aaKnown RBP16.65■□□□□ 0.26
TRIM39-209ENST00000428728 HSD11B2P80365 405 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 GPR19Q15760 415 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 DENND5AQ6IQ26 1287 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 ARHGEF18Q6ZSZ5 1173 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 SNX20Q7Z614 316 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 KMT5CQ86Y97 462 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 LRRC45Q96CN5 670 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 PPP1R2P1Q96PQ5 205 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 RUFY1Q96T51 708 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 COPS8Q99627 209 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 ACTL8Q9H568 366 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 ANAPC2Q9UJX6 822 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 TP53TG5Q9Y2B4 290 aa16.65■□□□□ 0.26
TRIM39-209ENST00000428728 PIPSLA2A3N6 862 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 CFAP99D6REC4 459 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 CREG1O75629 220 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 ZBTB11O95625 1053 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 PRSS56P0CW18 603 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 POLR2CP19387 275 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 MC4RP32245 332 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 VAV2P52735 878 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 RPS18P62269 152 aaKnown RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 MSLNQ13421 630 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 ZRANB3Q5FWF4 1079 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 FAM199XQ6PEV8 388 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms