RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DPPA2Q7Z7J5 298 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TMEM126BQ8IUX1 230 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SLC22A9Q8IVM8 553 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DCP1BQ8IZD4 617 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ZNF540Q8NDQ6 660 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ZMIZ2Q8NF64 920 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 YIPF5Q969M3 257 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PYCR2Q96C36 320 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TMCO6Q96DC7 493 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CENPNQ96H22 339 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SAMD11Q96NU1 681 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PIGSQ96S52 555 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ACOX2Q99424 681 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 NELL2Q99435 816 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 BEX1Q9HBH7 125 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FBRSL1Q9HCM7 1045 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SPAG4Q9NPE6 437 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SETD4Q9NVD3 440 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 EMCNQ9ULC0 261 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 MAPRE3Q9UPY8 281 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 MRPL42Q9Y6G3 142 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DICER1Q9UPY3 1922 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ASTN1O14525 1302 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 EDC4Q6P2E9 1401 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 A0A0B4J293 547 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 NR5A2O00482 541 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 BET1O15155 118 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FAM189A1O60320 539 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PLIN3O60664 434 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FOSP01100 380 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 LDLRP01130 860 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ARP10275 920 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TFEBP19484 476 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 GADD45AP24522 165 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 LTKP29376 864 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ATP5OP48047 213 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 RFX2P48378 723 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 IRF9Q00978 393 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CSTF1Q05048 431 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PPP3CAQ08209 521 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FGL1Q08830 312 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ADAM15Q13444 863 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 SLC9A5Q14940 896 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ARMCX4Q5H9R4 360 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 BICRALQ6AI39 1079 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TAF2Q6P1X5 1199 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 EPGNQ6UW88 154 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 AGMOQ6ZNB7 445 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PIWIL4Q7Z3Z4 852 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 LUZP2Q86TE4 346 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 NLGN4YQ8NFZ3 816 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 COQ8AQ8NI60 647 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 SMG7Q92540 1137 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 WNT2BQ93097 391 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 RNF31Q96EP0 1072 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FRMD6Q96NE9 622 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CYP4F12Q9HCS2 524 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TOPORSQ9NS56 1045 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 NLKQ9UBE8 527 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ZDHHC2Q9UIJ5 367 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 AGO1Q9UL18 857 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CDY1Q9Y6F8 540 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ABCA9Q8IUA7 1624 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 MROH1Q8NDA8 1641 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 OR2W5A6NFC9 320 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 GSTA4O15217 222 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PDE9AO76083 593 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 MT-ND2P03891 347 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ACSM4P0C7M7 580 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 NDUFB7P17568 137 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CPT1AP50416 773 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 GBX2P52951 348 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 PLK1P53350 603 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CASP9P55211 416 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 HSF2Q03933 536 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TLE2Q04725 743 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 EXOSC2Q13868 293 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 INPP5AQ14642 412 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TEAD4Q15561 434 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 KLHL12Q53G59 568 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 RUNDC3AQ59EK9 446 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 ARL13AQ5H913 290 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 RABL3Q5HYI8 236 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TOR1AIP1Q5JTV8 583 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 HES5Q5TA89 166 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 CES5AQ6NT32 575 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 TEX261Q6UWH6 196 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 LRRC8DQ7L1W4 858 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 LACC1Q8IV20 430 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 EMC1Q8N766 993 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 BPIFB1Q8TDL5 484 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 FRS2Q8WU20 508 aa6.76□□□□□ -1.33
CNOT4-205ENST00000423368 MRPL48Q96GC5 212 aaKnown RBP6.76□□□□□ -1.33
CNOT4-205ENST00000423368 QKIQ96PU8 341 aaKnown RBP eCLIP6.76□□□□□ -1.337e-7■■■■■ 60.4
CNOT4-205ENST00000423368 PAPOLGQ9BWT3 736 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms