RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CCDC159P0C7I6 412 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 UROSP10746 265 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 ITGB6P18564 788 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 HTR6P50406 440 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 SIM2Q14190 667 aaPredicted RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 CLCA4Q14CN2 919 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 ACOX1Q15067 660 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 TRIP4Q15650 581 aaPredicted RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 COLEC12Q5KU26 742 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 STEAP3Q658P3 488 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 TIGD7Q6NT04 549 aaPredicted RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 ATP6V0D2Q8N8Y2 350 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 OR52B6Q8NGF0 335 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 STAG3L4Q8TBR4 150 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 BLOC1S5Q8TDH9 187 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 KIAA1191Q96A73 305 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 BARD1Q99728 777 aaKnown RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 CATSPERBQ9H7T0 1116 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 C3orf18Q9UK00 162 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 MED16Q9Y2X0 877 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 PCDHB14Q9Y5E9 798 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 PCDHGB1Q9Y5G3 927 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 UBA6A0AVT1 1052 aaPredicted RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 PTGESO14684 152 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 UPK1BO75841 260 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 CHEK2O96017 543 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 PTPN2P17706 415 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 SUOXP51687 545 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 CDC20Q12834 499 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 UBXN11Q5T124 520 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 RNF19BQ6ZMZ0 732 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 POC5Q8NA72 575 aa16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 FUBP1Q96AE4 644 aaKnown RBP16.43■□□□□ 0.22
NPC1L1-203ENST00000423141 RFPL2O75678 378 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 ATXN1LP0C7T5 689 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 HAPLN1P10915 354 aaPredicted RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 DARSP14868 501 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 HOXC13P31276 330 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 GRIK1P39086 918 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 AFF1P51825 1210 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 SVOPLQ8N434 492 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 FAM83FQ8NEG4 500 aaPredicted RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 ZNF548Q8NEK5 533 aaPredicted RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 LGALS12Q96DT0 336 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 ZNF486Q96H40 463 aaPredicted RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 PPP1R2P1Q96PQ5 205 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 AARSD1Q9BTE6 412 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 THUMPD3Q9BV44 507 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 TRIT1Q9H3H1 467 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 AGO3Q9H9G7 860 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 CPNE5Q9HCH3 593 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 OSER1Q9NX31 292 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 VNN3Q9NY84 501 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 EIF2B4Q9UI10 523 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 FGF10O15520 208 aaPredicted RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 IRAK2O43187 625 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 SLC25A27O95847 323 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 NPPAP01160 153 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 RYKP34925 604 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 IL1RL1Q01638 556 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 DET1Q7L5Y6 550 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 PYCR2Q96C36 320 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 NUSAP1Q9BXS6 441 aaKnown RBP16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 GORASP2Q9H8Y8 452 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 IPPQ9Y573 584 aa16.42■□□□□ 0.22
NPC1L1-203ENST00000423141 ANKRD34BA5PLL1 514 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 E9PAM4 449 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 BTN3A1O00481 513 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 RHOBTB1O94844 696 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 IGLV3-25P01717 112 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 FMO4P31512 558 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 ARL1P40616 181 aaPredicted RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 SLC35A2P78381 396 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 PWP1Q13610 501 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 CYP20A1Q6UW02 462 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 MMAAQ8IVH4 418 aaKnown RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 EID3Q8N140 333 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 RTL3Q8N8U3 475 aaKnown RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 MCFD2Q8NI22 146 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 FBLIM1Q8WUP2 373 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 ZNF566Q969W8 418 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 FAM162AQ96A26 154 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 BCL7BQ9BQE9 202 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 SP140LQ9H930 580 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 ZBTB20Q9HC78 741 aaPredicted RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 POLR3HQ9Y535 204 aaPredicted RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 TTC3P53804 2025 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 SLC16A6O15403 523 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 CYP11A1P05108 521 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 EIF2S1P05198 315 aaKnown RBP16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 GGT5P36269 586 aa16.41■□□□□ 0.22
NPC1L1-203ENST00000423141 HK3P52790 923 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms