RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NCEH1Q6PIU2 408 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CYP20A1Q6UW02 462 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RAD9BQ6WBX8 426 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 B3GNT6Q6ZMB0 384 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CCNI2Q6ZMN8 369 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 ZNF517Q6ZMY9 492 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 C4orf50Q6ZRC1 276 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 APTXQ7Z2E3 356 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 ATG9AQ7Z3C6 839 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 HAPLN4Q86UW8 402 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 GLCCI1Q86VQ1 547 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SPATA2LQ8IUW3 424 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 FAM114A1Q8IWE2 563 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CD302Q8IX05 232 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CCDC13Q8IYE1 715 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 DSELQ8IZU8 1212 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TTC5Q8N0Z6 440 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SLC35F6Q8N357 371 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MMGT1Q8N4V1 131 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 EIF1ADQ8N9N8 165 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 C9orf106Q8NAJ2 232 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ANKRD52Q8NB46 1076 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CLEC18CQ8NCF0 446 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TRIM58Q8NG06 486 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 OR8K1Q8NGG5 319 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MAGEC3Q8TD91 643 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TMED6Q8WW62 240 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ARHGEF2Q92974 986 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 MTBPQ96DY7 904 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 METTL2AQ96IZ6 378 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 HARBI1Q96MB7 349 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TMEM68Q96MH6 324 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 NEUROD6Q96NK8 337 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SH3GL2Q99962 352 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 KXD1Q9BQD3 176 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RHOXF2Q9BQY4 288 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 DESI2Q9BSY9 194 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 HAUS8Q9BT25 410 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CAPS2Q9BXY5 557 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 KRT23Q9C075 422 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MUC13Q9H3R2 512 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RNF41Q9H4P4 317 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 ESRP2Q9H6T0 727 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 MAGEF1Q9HAY2 307 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 HINT3Q9NQE9 182 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 CNGB3Q9NQW8 809 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CWC25Q9NXE8 425 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 ABI3Q9P2A4 366 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SLCO3A1Q9UIG8 710 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 FBXO2Q9UK22 296 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 FAM169AQ9Y6X4 670 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 PAPPAQ13219 1627 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 DLEC1Q9Y238 1755 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 PLCH1Q4KWH8 1693 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ROBO1Q9Y6N7 1651 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 AKAP11Q9UKA4 1901 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 UBN2Q6ZU65 1347 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 GLI3P10071 1580 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ANKRD36CQ5JPF3 1778 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 BCORQ6W2J9 1755 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CASZ1Q86V15 1759 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 RGPD5Q99666 1765 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 IGKV2D-30A0A075B6S6 120 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 A0A1W2PQF6 199 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CPED1A4D0V7 1026 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 H0YHG0 523 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 NDUFAB1O14561 156 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 GPAA1O43292 621 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 KCNAB3O43448 404 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 N4BP1O75113 896 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 SLC25A12O75746 678 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MLYCDO95822 493 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CYC1P08574 325 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 UQCRFS1P1P0C7P4 283 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 IGHV4-30-4P0DP06 118 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ACADMP11310 421 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PCP11498 1178 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 LAMP2P13473 410 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CDH2P19022 906 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 MAOAP21397 527 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PPARGP37231 505 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 EIF2S3P41091 472 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 PEX5P50542 639 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 DSCR9P59020 149 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ARF3P61204 181 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 ARF1P84077 181 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 ZXDBP98169 803 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ECT2LQ008S8 904 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 KIF5AQ12840 1032 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 DHX34Q14147 1143 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 SIM2Q14190 667 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 MTF1Q14872 753 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MAPRE1Q15691 268 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 MEA1Q16626 185 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CCDC57Q2TAC2 916 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 EIF2S3LQ2VIR3 472 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 AMZ1Q400G9 498 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 XKR9Q5GH70 373 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 TCP11X2Q5H9J9 407 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CXorf66Q5JRM2 361 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms