RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SNX2O60749 519 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PIAS2O75928 621 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RETP07949 1114 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 CNTFP26441 200 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RPL10P27635 214 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PDHA2P29803 388 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RAB10P61026 200 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 BNIP3Q12983 259 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SF3A2Q15428 464 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SHBQ15464 509 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 HLA-BQ31612 363 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PPM1JQ5JR12 505 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PLA2G2CQ5R387 149 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 TSPAN17Q96FV3 270 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ELF4Q99607 663 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 NUSAP1Q9BXS6 441 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 VPS11Q9H270 941 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PCMTD2Q9NV79 361 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 TRNAU1APQ9NX07 287 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RUVBL2Q9Y230 463 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 DHRS7Q9Y394 339 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ZNF292O60281 2723 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SLC5A10A0PJK1 596 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 MAP2K7O14733 419 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 KHNYNO15037 678 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 RFPL1O75677 317 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 EML2O95834 649 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 APOA4P06727 396 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SLC35E2BP0CK96 405 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ZNF37AP17032 561 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ENGP17813 658 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 TYK2P29597 1187 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 BLKP51451 505 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 LGSNQ5TDP6 509 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
CNOT4-204ENST00000414802 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ANKRD49Q8WVL7 239 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 INPP5DQ92835 1189 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 ISL2Q96A47 359 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 MTBPQ96DY7 904 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 IRF2BPLQ9H1B7 796 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 CDYLQ9Y232 598 aa12.86□□□□□ -0.35
CNOT4-204ENST00000414802 PRR19A6NJB7 356 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 PDZK1P1A8MUH7 402 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 AQP9O43315 295 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 GPC4O75487 556 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 MT-ND3P03897 115 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 VCLP18206 1134 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 EPHA8P29322 1005 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 MAGEA12P43365 314 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 DLG1Q12959 904 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 LRP8Q14114 963 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 RASA2Q15283 850 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 PLEKHS1Q5SXH7 462 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 UGT3A1Q6NUS8 523 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 GATAD2AQ86YP4 633 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 SRRM1Q8IYB3 904 aaKnown RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 GPBAR1Q8TDU6 330 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 EEF1AKMT1Q8WVE0 214 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 SKA2Q8WVK7 121 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 TMEM159Q96B96 161 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 GSDMCQ9BYG8 508 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 KCNH6Q9H252 994 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 ERVMER34-1Q9H9K5 563 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 PRDM8Q9NQV8 689 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 TBC1D29Q9UFV1 150 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 DNMT3AQ9Y6K1 912 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-204ENST00000414802 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
CNOT4-204ENST00000414802 A0A096LPK6 155 aa12.84□□□□□ -0.35
CNOT4-204ENST00000414802 A0A1B0GTQ1 180 aa12.84□□□□□ -0.35
CNOT4-204ENST00000414802 C17orf113A0A1B0GUU1 675 aa12.84□□□□□ -0.35
CNOT4-204ENST00000414802 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms