RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ZNF143P52747 638 aaPredicted RBP15.3■□□□□ 0.04
CPNE1-208ENST00000414711 ZFYVE27Q5T4F4 411 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 TMEM121Q9BTD3 319 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 NDC1Q9BTX1 674 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 DTLQ9NZJ0 730 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 TNFRSF10DQ9UBN6 386 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 NDOR1Q9UHB4 597 aa15.3■□□□□ 0.04
CPNE1-208ENST00000414711 SLC9B1P1A6NJY1 282 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 SLC19A2O60779 497 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 MSL3P1P0C860 447 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 VCLP18206 1134 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 MMP13P45452 471 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 GSCP56915 257 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-208ENST00000414711 RPE65Q16518 533 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 CA9Q16790 459 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 LONRF1Q17RB8 773 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 ISLR2Q6UXK2 745 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 LINC00696Q6ZRV3 163 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 ANKRD20A12PQ8NF67 263 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 NRGNQ92686 78 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 SPATA16Q9BXB7 569 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 LHPPQ9H008 270 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 TSPY26PQ9H489 355 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 DHX35Q9H5Z1 703 aaKnown RBP15.29■□□□□ 0.04
CPNE1-208ENST00000414711 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 TINAGQ9UJW2 476 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 SERTAD3Q9UJW9 196 aa15.29■□□□□ 0.04
CPNE1-208ENST00000414711 OR6C74A6NCV1 312 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 KIAA1324LA8MWY0 1029 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CNOT3O75175 753 aaKnown RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 MTX2O75431 263 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CYP1A1P04798 512 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CD63P08962 238 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CBSLP0DN79 551 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CDH3P22223 829 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 MST1P26927 711 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CBSP35520 551 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 PTP4A2Q12974 167 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 MFAP5Q13361 173 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 C3AR1Q16581 482 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 C1orf189Q5VU69 101 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 Q71RC1 249 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 TMEM200AQ86VY9 491 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 TMEM151BQ8IW70 566 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 TEKT4Q8WW24 435 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 GLYATL1Q969I3 302 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 LYSMD1Q96S90 227 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 ABI3Q9P2A4 366 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 IFT80Q9P2H3 777 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CDYLQ9Y232 598 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 COL6A5A8TX70 2615 aa15.28■□□□□ 0.04
CPNE1-208ENST00000414711 CCDC88CQ9P219 2028 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 RGSL1A5PLK6 1076 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 FGFR1OPO95684 399 aaKnown RBP15.27■□□□□ 0.04
CPNE1-208ENST00000414711 ARG2P78540 354 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 SLC9A5Q14940 896 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 CXXC5Q7LFL8 322 aaKnown RBP15.27■□□□□ 0.04
CPNE1-208ENST00000414711 C11orf96Q7Z7L8 435 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 PRIMA1Q86XR5 153 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 TRAPPC5Q8IUR0 188 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 C3orf20Q8ND61 904 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 ADAMTS18Q8TE60 1221 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 MCEEQ96PE7 176 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 KCTD15Q96SI1 283 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-208ENST00000414711 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
CPNE1-208ENST00000414711 POMT2Q9UKY4 750 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 CHKBQ9Y259 395 aa15.27■□□□□ 0.04
CPNE1-208ENST00000414711 ANKRD62A6NC57 917 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 LMAN1P49257 510 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 ZNF165P49910 485 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 GALNT3Q14435 633 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 ANKRD20A8PQ5CZ79 823 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 PPP1R15BQ5SWA1 713 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 MARC1Q5VT66 337 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 BIVMQ86UB2 503 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 CCHCR1Q8TD31 782 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 NACC2Q96BF6 587 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 CNPY3Q9BT09 278 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 ZSCAN5AQ9BUG6 496 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 TDRD1Q9BXT4 1180 aaKnown RBP15.26■□□□□ 0.03
CPNE1-208ENST00000414711 GPAMQ9HCL2 828 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 NT5MQ9NPB1 228 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 C1GALT1Q9NS00 363 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 CCM2LQ9NUG4 571 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-208ENST00000414711 IMP3Q9NV31 184 aaKnown RBP15.26■□□□□ 0.03
CPNE1-208ENST00000414711 PSMD13Q9UNM6 376 aa15.26■□□□□ 0.03
CPNE1-208ENST00000414711 FN1P02751 2386 aaKnown RBP15.26■□□□□ 0.03
CPNE1-208ENST00000414711 TRAV17A0A0B4J275 112 aa15.25■□□□□ 0.03
CPNE1-208ENST00000414711 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms