RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MGAT5Q09328 741 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 MGAT2Q10469 447 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KIF5AQ12840 1032 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 ZBTB17Q13105 803 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 FGL2Q14314 439 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 IHHQ14623 411 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 ZNF284Q2VY69 593 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SETMARQ53H47 684 aaPredicted RBP4.88□□□□□ -1.63
VPS41-205ENST00000414632 ZNF542PQ5EBM4 170 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 THEMIS2Q5TEJ8 643 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 MARC1Q5VT66 337 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KANK2Q63ZY3 851 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SLC9A4Q6AI14 798 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 NAPEPLDQ6IQ20 393 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GCNT7Q6ZNI0 430 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 DGLUCYQ7Z3D6 616 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KDELC2Q7Z4H8 507 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 PTAR1Q7Z6K3 402 aaPredicted RBP4.88□□□□□ -1.63
VPS41-205ENST00000414632 TRIM69Q86WT6 500 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 HORMAD1Q86X24 394 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 FAM129CQ86XR2 697 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GATAD2AQ86YP4 633 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GLB1L2Q8IW92 636 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 CCDC13Q8IYE1 715 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KATNAL2Q8IYT4 538 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 LRRC57Q8N9N7 239 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 AGBL5Q8NDL9 886 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GPR156Q8NFN8 814 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KIAA1524Q8TCG1 905 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 CXorf40AQ8TE69 158 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
VPS41-205ENST00000414632 NSMCE1Q8WV22 266 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 RGMAQ96B86 450 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 LRIG1Q96JA1 1093 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SGCZQ96LD1 299 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 ZNF830Q96NB3 372 aaPredicted RBP4.88□□□□□ -1.63
VPS41-205ENST00000414632 ZNF599Q96NL3 588 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 AGAP3Q96P47 875 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 PSKH2Q96QS6 385 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SEMA3CQ99985 751 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SOX7Q9BT81 388 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SLC17A9Q9BYT1 436 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 BRD8Q9H0E9 1235 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 PCED1AQ9H1Q7 454 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GAREM1Q9H706 876 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 ATP13A3Q9H7F0 1226 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 PREBQ9HCU5 417 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 LZTFL1Q9NQ48 299 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 RBM22Q9NW64 420 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS41-205ENST00000414632 MAGEL2Q9UJ55 1249 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 GUCA1BQ9UMX6 200 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 PLA2G2DQ9UNK4 145 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 RAI2Q9Y5P3 530 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 WDFY3Q8IZQ1 3526 aa4.88□□□□□ -1.63
VPS41-205ENST00000414632 SPTBN2O15020 2390 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PTPRBP23467 1997 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 FRYQ5TBA9 3013 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CXorf51AA0A1B0GTR3 108 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SPAARA0A1B0GVQ0 90 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 A0A1W2PR77 199 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 MED19A0JLT2 244 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 TSPAN11A1L157 253 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 OR14I1A6ND48 311 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 POM121BA6NF01 834 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 FAM171A2A8MVW0 826 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 BTNL10A8MVZ5 291 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 C10orf142B7Z368 130 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PRAMEF26H0Y7S4 382 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TLR4O00206 839 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 AREL1O15033 823 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SCAMP1O15126 338 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 MATN3O15232 486 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SLC16A6O15403 523 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 ARHGAP6O43182 974 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 FOXD2O60548 495 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 KCNK5O95279 499 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CER1O95813 267 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 IL18BPO95998 194 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SLC4A1P02730 911 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PCCBP05166 539 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PDHA1P08559 390 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 ALPIP09923 528 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 THEGLP0DJG4 465 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 C6P13671 934 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CCNB1P14635 433 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CR2P20023 1033 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 HNRNPA2B1P22626 353 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 CCNCP24863 283 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 AKT2P31751 481 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CTNNA1P35221 906 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 MMP12P39900 470 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CD86P42081 329 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CSNK1DP48730 415 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PRIM2P49643 509 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 NOVA1P51513 510 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 RENBPP51606 427 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 LIMK1P53667 647 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms