RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 EPHA4P54764 986 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 CSE1LP55060 971 aaKnown RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 PPP1CAP62136 330 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 MRPS25P82663 173 aaKnown RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 CDK16Q00536 496 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 SQSTM1Q13501 440 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SSB-203ENST00000413002 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 HM13Q8TCT9 377 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 GRK7Q8WTQ7 553 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 USP7Q93009 1102 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSB-203ENST00000413002 RNF31Q96EP0 1072 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 ZNF578Q96N58 590 aaPredicted RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 CMKLR1Q99788 373 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 KIFC1Q9BW19 673 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 COG4Q9H9E3 785 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 THSD1Q9NS62 852 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 CATSPERZQ9NTU4 200 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 OCIAD1Q9NX40 245 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 ASIC3Q9UHC3 531 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 ACSL5Q9ULC5 683 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 LAMA5O15230 3695 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 CDRT15L2A8MXV6 281 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 CD3EAPO15446 510 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 KIF1CO43896 1103 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 ITGA2BP08514 1039 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 ARNTP27540 789 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 SLC5A2P31639 672 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 NSG1P42857 185 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 SARNPP82979 210 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 EIF3IQ13347 325 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 BOP1Q14137 746 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 ITIH4Q14624 930 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 COL28A1Q2UY09 1125 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 CAPRIN2Q6IMN6 1127 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 FAM129CQ86XR2 697 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 AVL9Q8NBF6 648 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 LKAAEAR1Q8TD35 194 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 FCRL3Q96P31 734 aaPredicted RBP12.84□□□□□ -0.35
SSB-203ENST00000413002 SERPINB12Q96P63 405 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 OR52A5Q9H2C5 316 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 UCK1Q9HA47 277 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 ANAPC5Q9UJX4 755 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 SOX13Q9UN79 622 aa12.84□□□□□ -0.35
SSB-203ENST00000413002 C17orf113A0A1B0GUU1 675 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 EFCAB7A8K855 629 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 C9orf172C9J069 976 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 AP3B1O00203 1094 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 CAPN5O15484 640 aaPredicted RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 PRAMEF10O60809 474 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 BANF1O75531 89 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 AP2A2O94973 939 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
SSB-203ENST00000413002 ARCN1P48444 511 aaKnown RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 SEPHS1P49903 392 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 PCBP4P57723 403 aaKnown RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 ERVPABLB-1P60509 514 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 PRKG2Q13237 762 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 KRT33BQ14525 404 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 RNASEH2BQ5TBB1 312 aaKnown RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 LYPLAL1Q5VWZ2 237 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 IRGCQ6NXR0 463 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 FAM92BQ6ZTR7 304 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 ARHGAP22Q7Z5H3 698 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 ZFAND4Q86XD8 727 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 SPACA3Q8IXA5 215 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 KRT222Q8N1A0 295 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 NAT8LQ8N9F0 302 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 ELMO1Q92556 727 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 ART4Q93070 314 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 PWWP2AQ96N64 755 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 FERD3LQ96RJ6 166 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 CTRCQ99895 268 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 TRIM51Q9BSJ1 452 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 AKAP7Q9P0M2 348 aaPredicted RBP12.83□□□□□ -0.36
SSB-203ENST00000413002 PDP2Q9P2J9 529 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 MAD1L1Q9Y6D9 718 aa12.83□□□□□ -0.36
SSB-203ENST00000413002 A0A087WV48 116 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 OR6C74A6NCV1 312 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 SDR42E2A6NKP2 422 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
SSB-203ENST00000413002 TTI1O43156 1089 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 RRP8O43159 456 aaKnown RBP12.82□□□□□ -0.36
SSB-203ENST00000413002 KLK10O43240 276 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 OR56A5P0C7T3 313 aa12.82□□□□□ -0.36
SSB-203ENST00000413002 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms