RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 RBM41Q96IZ5 413 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 C12orf66Q96MD2 445 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 FSD1LQ9BXM9 530 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 LACRTQ9GZZ8 138 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 ASB8Q9H765 288 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 SLC24A2Q9UI40 661 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 TRHDEQ9UKU6 1024 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 PKP3Q9Y446 797 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 DNMT3AQ9Y6K1 912 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 LRRK2Q5S007 2527 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 USP9XQ93008 2570 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 CDC14CA4D256 554 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 MGAT4DA6NG13 374 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 CREG1O75629 220 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 POLBP06746 335 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 MSH3P20585 1137 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 AKT1P31749 480 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ZNF140P52738 457 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 GEMP55040 296 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 IL10RAQ13651 578 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ITGA9Q13797 1035 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 PLCL1Q15111 1095 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 TAF1AQ15573 450 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ZDHHC20Q5W0Z9 365 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 CAPRIN2Q6IMN6 1127 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 SARM1Q6SZW1 724 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 OR2L2Q8NH16 312 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 UBXN4Q92575 508 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ZNF501Q96CX3 271 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ZNF514Q96K75 400 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 ACTL8Q9H568 366 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 FGF21Q9NSA1 209 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 HRASLS2Q9NWW9 162 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 TLK1Q9UKI8 766 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 PLAAQ9Y263 795 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 PCDHGA6Q9Y5G7 932 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 PCDHA3Q9Y5H8 950 aa16.09■□□□□ 0.17
SCAMP4-203ENST00000411971 OR6C74A6NCV1 312 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 TLCD2A6NGC4 264 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 KCNN4O15554 427 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 LDB2O43679 373 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 RBP3P10745 1247 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 PYGMP11217 842 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 EIF3EP60228 445 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 MC1RQ01726 317 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 GPS2Q13227 327 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 BCL7AQ4VC05 210 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 LACTB2Q53H82 288 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 CPZQ66K79 652 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 RAD9BQ6WBX8 426 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 KLHDC8BQ8IXV7 354 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 D2HGDHQ8N465 521 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 OSBPL8Q9BZF1 889 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 ZCCHC2Q9C0B9 1178 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 KIR3DX1Q9H7L2 352 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 ANAPC2Q9UJX6 822 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 RARRES3Q9UL19 164 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 PADI1Q9ULC6 663 aa16.08■□□□□ 0.16
SCAMP4-203ENST00000411971 SHANK1Q9Y566 2161 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 PIPSLA2A3N6 862 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 CLEC18AA5D8T8 446 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 POLR2CP19387 275 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 PDHA2P29803 388 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 ABRQ12979 859 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 CHAF1BQ13112 559 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 CLEC18BQ6UXF7 455 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 CFAP206Q8IYR0 622 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 CLEC18CQ8NCF0 446 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 DNAJC1Q96KC8 554 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 TRIM5Q9C035 493 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 TWSG1Q9GZX9 223 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 PDE7BQ9NP56 450 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 POLHQ9Y253 713 aa16.07■□□□□ 0.16
SCAMP4-203ENST00000411971 MACROD2A1Z1Q3 448 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 ANXA9O76027 345 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 METTL18O95568 372 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PTMSP20962 102 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 CTNNA2P26232 953 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PTPN7P35236 360 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PRLHRP49683 370 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 MLLT10P55197 1068 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 HSD11B2P80365 405 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 ZNF789Q5FWF6 425 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 KCTD11Q693B1 232 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 ZNF517Q6ZMY9 492 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 NXPE1Q8N323 547 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 LRRC57Q8N9N7 239 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PHC3Q8NDX5 983 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 ACRBPQ8NEB7 543 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 OR4E2Q8NGC2 313 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 SPATA13Q96N96 652 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 TLR10Q9BXR5 811 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 OR52A5Q9H2C5 316 aa16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PIH1D1Q9NWS0 290 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-203ENST00000411971 PCDHB3Q9Y5E6 796 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms