RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GRIP2Q9C0E4 1043 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 SLITRK2Q9H156 845 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 MANSC1Q9H8J5 431 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF334Q9HCZ1 680 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 DNMT3BQ9UBC3 853 aaKnown RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 MTCH2Q9Y6C9 303 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 PMF1-BGLAPU3KQ54 211 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 TRPC5OSA6NMA1 111 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CILPO75339 1184 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MT-CYBP00156 380 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MYL2P10916 166 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TOP3AQ13472 1001 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 NTRK3Q16288 839 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CDKN3Q16667 212 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CAPN13Q6MZZ7 669 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 C22orf39Q6P5X5 142 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SCIMPQ6UWF3 145 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PARM1Q6UWI2 310 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 USP49Q70CQ1 688 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KCNK18Q7Z418 384 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 C2orf73Q8N5S3 287 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KBTBD8Q8NFY9 601 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PROX1Q92786 737 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ART5Q96L15 291 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SPATA9Q9BWV2 254 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PHACTR1Q9C0D0 580 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ROGDIQ9GZN7 287 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PCBD2Q9H0N5 130 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 GPAMQ9HCL2 828 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TRPV5Q9NQA5 729 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 OBP2AQ9NY56 170 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 COQ3Q9NZJ6 369 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 HAO1Q9UJM8 370 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KCND3Q9UK17 655 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CLCA3PQ9Y6N3 262 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 DCDC2BA2VCK2 349 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 H7C2Y5 167 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KCNK1O00180 336 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MID1O15344 667 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KLK10O43240 276 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TPST1O60507 370 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 GPR37L1O60883 481 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SLC26A3P40879 764 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CHN2P52757 468 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 RPS24P62847 133 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ADAM15Q13444 863 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SLC18A3Q16572 532 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 LCLAT1Q6UWP7 414 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TAC4Q86UU9 113 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CDK20Q8IZL9 346 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 OR2AP1Q8NGE2 309 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SMPDL3BQ92485 455 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 GAL3ST3Q96A11 431 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 BTBD9Q96Q07 612 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ECSITQ9BQ95 431 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CHCHD6Q9BRQ6 235 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 DPY30Q9C005 99 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 EFCAB1Q9HAE3 211 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TM7SF3Q9NS93 570 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TMEM120BA0PK00 339 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 OR2AG2A6NM03 316 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 INSIG1O15503 277 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CLOCKO15516 846 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MAOBP27338 520 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MC4RP32245 332 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 SKIV2L2P42285 1042 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 NDST2P52849 883 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 STXBP1P61764 594 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 IRF8Q02556 426 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PWP1Q13610 501 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 RBM44Q6ZP01 1051 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PROSER1Q86XN7 944 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KCNJ9Q92806 393 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 PMEPA1Q969W9 287 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 CEP295NLQ96MC4 621 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 DDX47Q9H0S4 455 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ABCG8Q9H221 673 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 MRPS30Q9NP92 439 aaKnown RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 ENOPH1Q9UHY7 261 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TMCC3Q9ULS5 477 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 KCNE2Q9Y6J6 123 aa7.21□□□□□ -1.26
SCN9A-202ENST00000409435 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-202ENST00000409435 IGLV3-22A0A075B6J6 115 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 ILVBLA1L0T0 632 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 DLX3O60479 287 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 DHFRP00374 187 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 GZMAP12544 262 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 HSD3B2P26439 372 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 RPL5P46777 297 aaKnown RBP7.2□□□□□ -1.26
SCN9A-202ENST00000409435 CXCR3P49682 368 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF143P52747 638 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-202ENST00000409435 TAF5Q15542 800 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 NAB2Q15742 525 aa7.2□□□□□ -1.26
SCN9A-202ENST00000409435 BMT2Q1RMZ1 405 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms