RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 GPR180Q86V85 440 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 REXO5Q96IC2 774 aaKnown RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 ZFYVE19Q96K21 471 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 SMG9Q9H0W8 520 aaKnown RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 VAPAQ9P0L0 249 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 RAPGEFL1Q9UHV5 662 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ATP11BQ9Y2G3 1177 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 RAI2Q9Y5P3 530 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 DNAJC25-GNG10A0A024R161 153 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 SEC24AO95486 1093 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 MLYCDO95822 493 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ANXA6P08133 673 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 CPT1AP50416 773 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ZNF177Q13360 481 aaPredicted RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 TXNDC11Q6PKC3 985 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 LARP4Q71RC2 724 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNX13-201ENST00000409076 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 TFAP2CQ92754 450 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 RELTQ969Z4 430 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ZNF597Q96LX8 424 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 IL12RB2Q99665 862 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 BARD1Q99728 777 aaKnown RBP8.21□□□□□ -1.1
SNX13-201ENST00000409076 KCNS3Q9BQ31 491 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 RNF167Q9H6Y7 350 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 PCDHGA8Q9Y5G5 932 aa8.21□□□□□ -1.1
SNX13-201ENST00000409076 ALPK2Q86TB3 2170 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 DNAH14Q0VDD8 3507 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 LOXHD1Q8IVV2 1947 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 OR2AG2A6NM03 316 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 RPP40O75818 363 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 ANGPTL1O95841 491 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ATP5BP06576 529 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 GRK3P35626 688 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ERVPABLB-1P60509 514 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ENPEPQ07075 957 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CDH18Q13634 790 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 C6orf136Q5SQH8 315 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CARM1Q86X55 608 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MEX3DQ86XN8 651 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 BEND7Q8N7W2 519 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 OR5AK3PQ8NH89 298 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ZFP90Q8TF47 636 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MAL2Q969L2 176 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CEP19Q96LK0 163 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CHCHD6Q9BRQ6 235 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ELOVL6Q9H5J4 265 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MEAF6Q9HAF1 191 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SMIM35A0A1B0GVV1 85 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 PRR23AA6NEV1 266 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 INSIG1O15503 277 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 PKMP14618 531 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 IDO1P14902 403 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 PFKLP17858 780 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SDHBP21912 280 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 JAK1P23458 1154 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 NR4A2P43354 598 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 PPM1FP49593 454 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 ARSFP54793 590 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MRPS15P82914 257 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 ABRQ12979 859 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 OR4F3Q6IEY1 312 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 DOK6Q6PKX4 331 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 PIK3C3Q8NEB9 887 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 OSCP1Q8WVF1 389 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 FUNDC2Q9BWH2 189 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CCM2LQ9NUG4 571 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 PDP1Q9P0J1 537 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 TMEM181Q9P2C4 612 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 AGO1Q9UL18 857 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 ZNF232Q9UNY5 417 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 GMPPBQ9Y5P6 360 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 TRPV2Q9Y5S1 764 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ZNF646O15015 1829 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 GNG14A0A1W2PPG7 69 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 CHRNA1P02708 482 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 LCKP06239 509 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MBL2P11226 248 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 IMPDH2P12268 514 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SERPINB1P30740 379 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SGSHP51688 502 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MLLT6P55198 1093 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 DBPQ10586 325 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 GANABQ14697 944 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 MFSD14CQ5VZR4 134 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms