RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SERPINA9Q86WD7 417 aa18.83■□□□□ 0.61
SMARCB1-204ENST00000407422 CDKN2AIPNLQ96HQ2 116 aa18.83■□□□□ 0.61
SMARCB1-204ENST00000407422 ZDHHC3Q9NYG2 299 aa18.83■□□□□ 0.61
SMARCB1-204ENST00000407422 IGLV3-16A0A075B6K0 115 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 TRBV5-4A0A0C4DH59 114 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 KLHL33A6NCF5 533 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 B8ZZF3 427 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 H7C0S8 307 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 NKX2-8O15522 239 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 LIASO43766 372 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC35G4P0C7Q5 338 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 ACRV1P26436 265 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 ABHD18Q0P651 414 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 GSE1Q14687 1217 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 KCNAB1Q14722 419 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 OASLQ15646 514 aaKnown RBP18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 GPR33Q49SQ1 333 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 CAPRIN2Q6IMN6 1127 aaKnown RBP18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 PIANPQ8IYJ0 282 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 C1orf54Q8WWF1 131 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC45A3Q96JT2 553 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 MAP3K3Q99759 626 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 HRASLS2Q9NWW9 162 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SEMA5BQ9P283 1151 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 OR5K3A6NET4 321 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 CFAP99D6REC4 459 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 IL11RAQ14626 422 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 CCDC38Q502W7 563 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SEL1L2Q5TEA6 688 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 KLHL35Q6PF15 583 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 CERS6Q6ZMG9 384 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 TAS2R42Q7RTR8 314 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 PRUNE1Q86TP1 453 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC13A5Q86YT5 568 aaPredicted RBP18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 RASGRP3Q8IV61 690 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 CLDN19Q8N6F1 224 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 GALNT6Q8NCL4 622 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 OR52K1Q8NGK4 314 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 HM13Q8TCT9 377 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 KIAA1143Q96AT1 154 aaPredicted RBP18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SLC41A2Q96JW4 573 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 TSGA10Q9BZW7 698 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 KIR3DX1Q9H7L2 352 aa18.82■□□□□ 0.6
SMARCB1-204ENST00000407422 SPTBP11277 2137 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 MROH6A6NGR9 719 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ZNF891A8MT65 544 aaPredicted RBP18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 GOLGA6L6A8MZA4 724 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 PSMD3O43242 534 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 KRT86O43790 486 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 FGF5P12034 268 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 FOLR1P15328 257 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ITGB6P18564 788 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 STAT5AP42229 794 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ARCN1P48444 511 aaKnown RBP18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 NFATC3Q12968 1075 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ZNF658BQ4V348 819 aaPredicted RBP18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ESX1Q8N693 406 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 STYXQ8WUJ0 223 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 HEXDCQ8WVB3 486 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 TRIT1Q9H3H1 467 aaKnown RBP18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 ETNK1Q9HBU6 452 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 RPS6KL1Q9Y6S9 549 aa18.81■□□□□ 0.6
SMARCB1-204ENST00000407422 OR6C74A6NCV1 312 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 OR51F1A6NGY5 319 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 KIAA0754O94854 1291 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 TIAF1O95411 115 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 IFNB1P01574 187 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 PRKAR1AP10644 381 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 ETS1P14921 441 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 F8A1P23610 371 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 STIP1P31948 543 aaKnown RBP18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 SNX1Q13596 522 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 DBN1Q16643 649 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 DNTTIP2Q5QJE6 756 aaKnown RBP18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 ZFPM2Q8WW38 1151 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 UBXN4Q92575 508 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 PPM1MQ96MI6 270 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 NRTNQ99748 197 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 CCM2Q9BSQ5 444 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 OR52A5Q9H2C5 316 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 COG4Q9H9E3 785 aa18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 MRPS18BQ9Y676 258 aaKnown RBP18.8■□□□□ 0.6
SMARCB1-204ENST00000407422 C17orf113A0A1B0GUU1 675 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 SPAG6O75602 509 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 EBLN1P0CF75 366 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 PDHA2P29803 388 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 GRIA1P42261 906 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 GSDMDP57764 484 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 CACNG1Q06432 222 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 MAP7Q14244 749 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 MEI1Q5TIA1 1274 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 BORAQ6PGQ7 559 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 C6orf15Q6UXA7 325 aaPredicted RBP18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 LINC00523Q86TU6 105 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 OOSP2Q86WS3 158 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 PPP1R3BQ86XI6 285 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 GLIS1Q8NBF1 620 aa18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 SIDT2Q8NBJ9 832 aaKnown RBP18.79■□□□□ 0.6
SMARCB1-204ENST00000407422 OR4E2Q8NGC2 313 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms