RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CCNB2O95067 398 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 ANGPTL1O95841 491 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 KHKP50053 298 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 MTTPP55157 894 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 MC1RQ01726 317 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 ADNP2Q6IQ32 1131 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 CITED4Q96RK1 184 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 SRMSQ9H3Y6 488 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 ABCB9Q9NP78 766 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 PLK2Q9NYY3 685 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF221Q9UK13 617 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 DGKBQ9Y6T7 804 aa11.9□□□□□ -0.5
SMCR8-201ENST00000406438 WASHC1A8K0Z3 465 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 WASH3PC4AMC7 463 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 BPGMP07738 259 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 PKMP14618 531 aaKnown RBP11.9□□□□□ -0.51
SMCR8-201ENST00000406438 MPIP34949 423 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 WASH2PQ6VEQ5 465 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 UTS2BQ765I0 119 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 GPR65Q8IYL9 337 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 LRRN4Q8WUT4 740 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 HAS1Q92839 578 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 UFD1Q92890 307 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.51
SMCR8-201ENST00000406438 MRPS30Q9NP92 439 aaKnown RBP11.9□□□□□ -0.51
SMCR8-201ENST00000406438 B4GALT4O60513 344 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 AP2A1O95782 977 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 MREGQ8N565 214 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PRELID2Q8N945 189 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 HERVK_113Q902F9 699 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PMEPA1Q969W9 287 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 LRRC4CQ9HCJ2 640 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 OR2AG2A6NM03 316 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 E7ENX8 843 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 INSIG1O15503 277 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 TPST2O60704 377 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 LINGO3P0C6S8 592 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CMC1Q7Z7K0 106 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FBXO15Q8NCQ5 510 aaPredicted RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 NUP214P35658 2090 aaPredicted RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 TRMUO75648 421 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 AHCYP23526 432 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 HSD3B2P26439 372 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CCNKO75909 580 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 BPNT1O95861 308 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SLC5A3P53794 718 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FOXM1Q08050 763 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PLCZ1Q86YW0 608 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SVOPLQ8N434 492 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 TTLQ8NG68 377 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CLPTM1LQ96KA5 538 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CEP295NLQ96MC4 621 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 MRIQ9BWK5 157 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FANCFQ9NPI8 374 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 IQCF5A8MTL0 148 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PGRP06401 933 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 HSD11B1P28845 292 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 KLHL22Q53GT1 634 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 AHSA2Q719I0 299 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 P4HA3Q7Z4N8 544 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 OR6K6Q8NGW6 343 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 IRGQQ8WZA9 623 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SMG7Q92540 1137 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 ZSWIM3Q96MP5 696 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 POLMQ9NP87 494 aaPredicted RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 R3HDM2Q9Y2K5 976 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 DCCP43146 1447 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 MID1O15344 667 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SEMA3DO95025 777 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FSHRP23945 695 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF234Q14588 700 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 C4orf46Q504U0 113 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 C6orf52Q5T4I8 152 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 FIP1L1Q6UN15 594 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 C1orf216Q8TAB5 229 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SLC22A17Q8WUG5 538 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 AZIN2Q96A70 460 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 KLHL5Q96PQ7 755 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 GFM1Q96RP9 751 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 CD84Q9UIB8 345 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 SASH3O75995 380 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 ROR2Q01974 943 aaKnown RBP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 PPIGQ13427 754 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMCR8-201ENST00000406438 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
SMCR8-201ENST00000406438 LAPTM4BQ86VI4 370 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms