RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PTGR1Q14914 329 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 PHKG1Q16816 387 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 KLHL35Q6PF15 583 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 SUSD1Q6UWL2 747 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 DNAJC14Q6Y2X3 702 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 CHST9Q7L1S5 443 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 FNDC5Q8NAU1 212 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 OR56A4Q8NGH8 313 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 GTF2H4Q92759 462 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 PPM1MQ96MI6 270 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 HHIPQ96QV1 700 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TRIM15Q9C019 465 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 RETREG1Q9H6L5 497 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 CD320Q9NPF0 282 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 DOCK6Q96HP0 2047 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TRBV5-4A0A0C4DH59 114 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 K7ERQ8 282 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 NPPAP01160 153 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 GALTP07902 379 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 UMPSP11172 480 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 CDH1P12830 882 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 IST1P53990 364 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 IL2P60568 153 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 DPY19L1Q2PZI1 675 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 GTF2IRD2BQ6EKJ0 949 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 SLC8B1Q6J4K2 584 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TMEM214Q6NUQ4 689 aaKnown RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 RNF165Q6ZSG1 346 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 GTF2IRD2Q86UP8 949 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 HS3ST5Q8IZT8 346 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 LRRC43Q8N309 656 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 SLC22A12Q96S37 553 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 AMBRA1Q9C0C7 1298 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 SPC25Q9HBM1 224 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 NUDT4Q9NZJ9 180 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 MBD1Q9UIS9 605 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 POLR3HQ9Y535 204 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 C2orf81A6NN90 581 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CA12O43570 354 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 VPS26AO75436 327 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CLDN11O75508 207 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 IL10P22301 178 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ATP5C1P36542 298 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 ENTPD1P49961 510 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GALK1P51570 392 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SH3BGRP55822 239 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 PLCL1Q15111 1095 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CTU2Q2VPK5 515 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 FGD3Q5JSP0 725 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ATXN7L2Q5T6C5 722 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 RNF219Q5W0B1 726 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 TTC33Q6PID6 262 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 RBM23Q86U06 439 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 TBC1D21Q8IYX1 336 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 OR13F1Q8NGS4 319 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 HSPBAP1Q96EW2 488 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 MUS81Q96NY9 551 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SEPHS2Q99611 448 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CGREF1Q99674 301 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 RMI1Q9H9A7 625 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SERHLQ9NQF3 203 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TRMT6Q9UJA5 497 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 ZNF711Q9Y462 761 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 A0A087WXM4 84 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CBX4O00257 560 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TSPAN3O60637 253 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SEC24DO94855 1032 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 GLUD1P00367 558 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ESR1P03372 595 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 PTGER3P43115 390 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 FCGRTP55899 365 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GTF2H2Q13888 395 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 AARS2Q5JTZ9 985 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 LHX8Q68G74 356 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GLYATQ6IB77 296 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GTF2H2CQ6P1K8 395 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TMEM26Q6ZUK4 368 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CLVS1Q8IUQ0 354 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 TBC1D15Q8TC07 691 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 CYGBQ8WWM9 190 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TMBIM1Q969X1 311 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 SPON2Q9BUD6 331 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ELAC1Q9H777 363 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 NMRK2Q9NPI5 230 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 HMGCLP35914 325 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GDF5P43026 501 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 HLCSP50747 726 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ARSFP54793 590 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 PPP2R2BQ00005 443 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 GTDC1Q4AE62 458 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 ZRANB3Q5FWF4 1079 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 EFHBQ8N7U6 833 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 FBXO22Q8NEZ5 403 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TNIP2Q8NFZ5 429 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms