RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PTPN3P26045 913 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 BDKRB2P30411 391 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 AMPHP49418 695 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 FOXM1Q08050 763 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 MZT1Q08AG7 82 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 AP1B1Q10567 949 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 COASYQ13057 564 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ITGA7Q13683 1181 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 SMU1Q2TAY7 513 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD20A4Q4UJ75 823 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD20A8PQ5CZ79 823 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 GLRA4Q5JXX5 417 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD20A2Q5SQ80 823 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD20A1Q5TYW2 823 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD20A3Q5VUR7 823 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZDHHC20Q5W0Z9 365 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 FAM91A1Q658Y4 838 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 C15orf39Q6ZRI6 1047 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZNF367Q7RTV3 350 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 PALB2Q86YC2 1186 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 TUSC5Q8IXB3 177 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 DSELQ8IZU8 1212 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 NDUFAF2Q8N183 169 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 C10orf53Q8N6V4 93 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 EMC1Q8N766 993 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 SPC24Q8NBT2 197 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 C9orf43Q8TAL5 461 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZNF479Q96JC4 524 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 CCDC43Q96MW1 224 aaKnown RBP4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 OR6C1Q96RD1 312 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 C16orf70Q9BSU1 422 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 WNT5BQ9H1J7 359 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ISCUQ9H1K1 167 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 C17orf75Q9HAS0 396 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 PLAC1Q9HBJ0 212 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 RCC2Q9P258 522 aaKnown RBP4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 PADI3Q9ULW8 664 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 B3GALT5Q9Y2C3 310 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ABCC9O60706 1549 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 A0A1W2PPQ1 181 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKUB1A6NFN9 424 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 BECN2A8MW95 431 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 TMEM189-UBE2V1I3L0A0 370 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ANKRD28O15084 1053 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 SSX4O60224 188 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 KINO60870 393 aaKnown RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 NDUFS7O75251 213 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 MED24O75448 989 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 RAB40ALP0C0E4 278 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ARSBP15848 533 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 STMN1P16949 149 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 KCNA5P22460 613 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 PSMA3P25788 255 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 HOXA11P31270 313 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 GABRA5P31644 462 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 MTHFRP42898 656 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZNF75DP51815 510 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 TAS2R38P59533 333 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ACTN3Q08043 901 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 Q0VFX4 171 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 UBE2V1Q13404 147 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 TWISTNBQ3B726 338 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 RAB6CQ53S08 254 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 SFMBT2Q5VUG0 894 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 C18orf63Q68DL7 685 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ALKBH5Q6P6C2 394 aaKnown RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 BRAT1Q6PJG6 821 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 MOXD1Q6UVY6 613 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 GBP6Q6ZN66 633 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZC3HC1Q86WB0 502 aaKnown RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 CHERPQ8IWX8 916 aaKnown RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 PM20D2Q8IYS1 436 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 SLC4A11Q8NBS3 891 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 OR2AK2Q8NG84 335 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 WFIKKN2Q8TEU8 576 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 RND1Q92730 232 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 EXOC4Q96A65 974 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 RAB6CQ9H0N0 254 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 CATSPERBQ9H7T0 1116 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 IL1RAPL2Q9NP60 686 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 KRCC1Q9NPI7 259 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 MCM9Q9NXL9 1143 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 CACNG4Q9UBN1 327 aa4.78□□□□□ -1.64
HMGB1P13-201ENST00000406019 A0A1W2PP11 408 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 OOEPA6NGQ2 149 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 C5orf52A6NGY3 159 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 DDX39AO00148 427 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 RGS14O43566 566 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 OR10H2O60403 315 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 THEGLP0DJG4 465 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 EEF2P13639 858 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 EEF1B2P24534 225 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 TKTP29401 623 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 STX2P32856 288 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms