RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MAP10Q9P2G4 905 aa15.71■□□□□ 0.11
CHRFAM7A-203ENST00000401522 DEC1Q9P2X7 70 aa15.71■□□□□ 0.11
CHRFAM7A-203ENST00000401522 COL4A3Q01955 1670 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NME4O00746 187 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HNRNPRO43390 633 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GJB3O75712 270 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RHOBTB1O94844 696 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 H6PDO95479 791 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ATP6V1B2P21281 511 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 OPRD1P41143 372 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC6A11P48066 632 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GRB7Q14451 532 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 DMC1Q14565 340 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PTPRCAPQ14761 206 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AFTPHQ6ULP2 937 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ISLR2Q6UXK2 745 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ZBTB49Q6ZSB9 765 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 EFL1Q7Z2Z2 1120 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SPATA19Q7Z5L4 167 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AMIGO2Q86SJ2 522 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FBXO39Q8N4B4 442 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 OR7D4Q8NG98 312 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ZFP28Q8NHY6 868 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TRPC4APQ8TEL6 797 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TRIB3Q96RU7 358 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TMEM79Q9BSE2 394 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MUC13Q9H3R2 512 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TAS2R13Q9NYV9 303 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ANKRD33BA6NCL7 494 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CCDC160A6NGH7 325 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SYCE1LA8MT33 242 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SUPT3HB4E1H0 165 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HTRA2O43464 458 aaPredicted RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 KDELR3O43731 214 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NARSO43776 548 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SUPT3HO75486 399 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TIPRLO75663 272 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PABPC1P11940 636 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CAPN3P20807 821 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GRIA3P42263 894 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ZNF140P52738 457 aaPredicted RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CLCQ05315 142 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RAD51Q06609 339 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GRIK2Q13002 908 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RPS6KA2Q15349 733 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TMEM259Q4ZIN3 620 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 IL31Q6EBC2 164 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 LCN8Q6JVE9 175 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 OGFOD2Q6N063 350 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 APCDD1Q8J025 514 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CANT1Q8WVQ1 401 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TUBGCP3Q96CW5 907 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CDKN2AIPNLQ96HQ2 116 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC29A1Q99808 456 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CIB1Q99828 191 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MGME1Q9BQP7 344 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NUSAP1Q9BXS6 441 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ANKRD60Q9BZ19 345 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CCDC68Q9H2F9 335 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ETAA1Q9NY74 926 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SEPT3Q9UH03 358 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 POLG2Q9UHN1 485 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 INTS6Q9UL03 887 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RNF112Q9ULX5 631 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MYRFQ9Y2G1 1151 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AK5Q9Y6K8 562 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TICRRQ7Z2Z1 1910 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 COL4A2P08572 1712 aa15.7■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CXorf51AA0A1B0GTR3 108 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 LRRC14BA6NHZ5 514 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PPP6CO00743 305 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AKAP10O43572 662 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CRCPO75575 148 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RPS17P08708 135 aaKnown RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HGFP14210 728 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GLULP15104 373 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ZNF23P17027 643 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 EEF1DP29692 281 aaKnown RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FOXA1P55317 472 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 VPS26BQ4G0F5 336 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PITRM1Q5JRX3 1037 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 INTS11Q5TA45 600 aaKnown RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ANKS6Q68DC2 871 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 KRT80Q6KB66 452 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ADIPOR2Q86V24 386 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RALGPS2Q86X27 583 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC15A3Q8IY34 581 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 DCAF4L2Q8NA75 395 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HM13Q8TCT9 377 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ACDQ96AP0 544 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HIC2Q96JB3 615 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NSUN5Q96P11 429 aaKnown RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CCT7Q99832 543 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SPON2Q9BUD6 331 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TRIM54Q9BYV2 358 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TUBB1Q9H4B7 451 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 C8orf33Q9H7E9 229 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ACTR3BQ9P1U1 418 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 DUSP12Q9UNI6 340 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms