RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TXNDC16Q9P2K2 825 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PSMD13Q9UNM6 376 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 UNC13CQ8NB66 2214 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 EXOC1LA0A1B0GW35 172 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 H3BMM5 538 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 SNX2O60749 519 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 KCNJ13O60928 360 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PREPP48147 710 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 LIMK2P53671 638 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 BOP1Q14137 746 aaKnown RBP15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CLCA4Q14CN2 919 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 KLHL38Q2WGJ6 581 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 OTOAQ7RTW8 1153 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 GKN2Q86XP6 184 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CEP97Q8IW35 865 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 NAGSQ8N159 534 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 SIDT2Q8NBJ9 832 aaKnown RBP15.63■□□□□ 0.09
HMGA1-204ENST00000401473 HM13Q8TCT9 377 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 COG4Q9H9E3 785 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CAB39LQ9H9S4 337 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PCOLCE2Q9UKZ9 415 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 DHRS7Q9Y394 339 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 COMMD10Q9Y6G5 202 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 SPTBN2O15020 2390 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 TRBV23OR9-2A0A075B6M9 112 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 FAM95CA0A1B0GW59 222 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 E5RI56 91 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 TPP1O14773 563 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 ITGA2BP08514 1039 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 SAT1P21673 171 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-204ENST00000401473 TAS2R39P59534 338 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 SLC14A1Q13336 389 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 MROH9Q5TGP6 573 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 LVRNQ6Q4G3 990 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 TMEM207Q6UWW9 146 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 ABRAXAS1Q6UWZ7 409 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 EID2Q8N6I1 236 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 CD200R1Q8TD46 325 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
HMGA1-204ENST00000401473 GPR22Q99680 433 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 CORO1CQ9ULV4 474 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-204ENST00000401473 DOLKQ9UPQ8 538 aa15.62■□□□□ 0.09
HMGA1-204ENST00000401473 KLHL33A6NCF5 533 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 SLCO2B1O94956 709 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ANXA6P08133 673 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 GSTM1P09488 218 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 MYF5P13349 255 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 VCLP18206 1134 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 IDSP22304 550 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 MSH2P43246 934 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 LIMK1P53667 647 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 GSTM4Q03013 218 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 GBX1Q14549 363 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ZNF460Q14592 562 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 IYDQ6PHW0 289 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 OGFOD3Q6PK18 319 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ADGRD1Q6QNK2 874 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 OR4C6Q8NH72 309 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ASZ1Q8WWH4 475 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ELMO2Q96JJ3 720 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 CAMK1GQ96NX5 476 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 OR52A5Q9H2C5 316 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 TAS2R13Q9NYV9 303 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 NLGN3Q9NZ94 848 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ACSL5Q9ULC5 683 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 PCDHGB2Q9Y5G2 931 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 NFS1Q9Y697 457 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 PRAMEF33A0A0G2JMD5 474 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 OR52A4PA6NMU1 304 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 TM4SF5O14894 197 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 LIN7AO14910 233 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-204ENST00000401473 SIGLEC6O43699 453 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 SH3BP5O60239 455 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 NOBOXO60393 691 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 INHBAP08476 426 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 NUDT17P0C025 328 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 F3P13726 295 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 CD9P21926 228 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 FDXRP22570 491 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 BMPR2Q13873 1038 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ACSBG2Q5FVE4 666 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 FAM45BPQ6NSW5 357 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 PAQR3Q6TCH7 311 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 WASH2PQ6VEQ5 465 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 IQCKQ8N0W5 287 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 FAM45AQ8TCE6 357 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 ZDHHC1Q8WTX9 485 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 WASH6PQ9NQA3 447 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 SIRPGQ9P1W8 387 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 CTNNAL1Q9UBT7 734 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 FETUBQ9UGM5 382 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 SLC39A10Q9ULF5 831 aa15.61■□□□□ 0.09
HMGA1-204ENST00000401473 CFAP20Q9Y6A4 193 aaKnown RBP15.61■□□□□ 0.09
HMGA1-204ENST00000401473 F8W8V4 182 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 VPS26AO75436 327 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 ERLIN1O75477 346 aa15.6■□□□□ 0.09
HMGA1-204ENST00000401473 H2AFXP16104 143 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-204ENST00000401473 SUZ12Q15022 739 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms