RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ADRA1BP35368 520 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 EIF2DP41214 584 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ZCCHC8Q6NZY4 707 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF560Q96MR9 790 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 C8orf4Q9NR00 106 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 PAQR5Q9NXK6 330 aaPredicted RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 CENPXA8MT69 81 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 FAM20BO75063 409 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 USP17L7P0C7H9 530 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 S100A5P33763 92 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 POLR2JP52435 117 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 PAFAH1B3Q15102 231 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 SMU1Q2TAY7 513 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 RAP1GAP2Q684P5 730 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 AHSA2Q719I0 299 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ZDHHC17Q8IUH5 632 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 PTERQ96BW5 349 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 MBOAT4Q96T53 435 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 CPNE5Q9HCH3 593 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 COMMD8Q9NX08 183 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF487B1APH4 448 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 GABARAPO95166 117 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 CYBBP04839 570 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 ANXA6P08133 673 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 CDKN2DP55273 166 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 RBBP7Q16576 425 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 PAQR9Q6ZVX9 377 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 SENP8Q96LD8 212 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 ADGRE2Q9UHX3 823 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 INTS6Q9UL03 887 aaKnown RBP16.84■□□□□ 0.29
PTPRA-205ENST00000399903 RAP2AP10114 183 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 PRDX3P30048 256 aaKnown RBP16.84■□□□□ 0.29
PTPRA-205ENST00000399903 BRCC3P46736 316 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 TKTL1P51854 596 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 OR2B6P58173 313 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 CLCA4Q14CN2 919 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 SOWAHCQ53LP3 525 aaPredicted RBP16.84■□□□□ 0.29
PTPRA-205ENST00000399903 GALNT12Q8IXK2 581 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 SH3GL1Q99961 368 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 MCMBPQ9BTE3 642 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
PTPRA-205ENST00000399903 CARS2Q9HA77 564 aaKnown RBP16.84■□□□□ 0.29
PTPRA-205ENST00000399903 LEF1Q9UJU2 399 aaPredicted RBP16.84■□□□□ 0.29
PTPRA-205ENST00000399903 CYP4F2P78329 520 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 CYP4F3Q08477 520 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 CADM2Q8N3J6 435 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 SVOPQ8N4V2 548 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 OR10A6Q8NH74 314 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 DYNC2LI1Q8TCX1 351 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.29
PTPRA-205ENST00000399903 CRTAC1Q9NQ79 661 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 SCN3BQ9NY72 215 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 OR12D3Q9UGF7 316 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 TRHDEQ9UKU6 1024 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 SNX6Q9UNH7 406 aa16.83■□□□□ 0.29
PTPRA-205ENST00000399903 ASPDHA6ND91 283 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 YJEFN3A6XGL0 299 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 M0QX08 132 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 UPK1AO00322 258 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 FYNP06241 537 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 ENDOUP21128 410 aaKnown RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 CD52P31358 61 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 MAXP61244 160 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 WDR45BQ5MNZ6 344 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 TMEM207Q6UWW9 146 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 DET1Q7L5Y6 550 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 METTL4Q8N3J2 472 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 PIK3C3Q8NEB9 887 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 UBE2FQ969M7 185 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 RNF167Q9H6Y7 350 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 ACTR8Q9H981 624 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 RGS18Q9NS28 235 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 UBA6A0AVT1 1052 aaPredicted RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 PRKD3O94806 890 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 HSMCR30P0CW71 290 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 PRKCAP17252 672 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 THPOP40225 353 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 CRYBB1P53674 252 aaPredicted RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 CDK5R2Q13319 367 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 CEP78Q5JTW2 689 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 SLC47A1Q96FL8 570 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 AURKBQ96GD4 344 aaPredicted RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 SDR39U1Q9NRG7 319 aaPredicted RBP16.83■□□□□ 0.28
PTPRA-205ENST00000399903 C3orf18Q9UK00 162 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 COMMD10Q9Y6G5 202 aa16.83■□□□□ 0.28
PTPRA-205ENST00000399903 I6L893 689 aaPredicted RBP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 DIRAS1O95057 198 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 IFI30P13284 250 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ELNP15502 786 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 HERVK_113P63132 956 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 CAP1Q01518 475 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 PTPRCAPQ14761 206 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 CLEC20AQ6ZU45 233 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 BPIFB1Q8TDL5 484 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms