RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 WDR59Q6PJI9 974 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF571Q7Z3V5 609 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FCRL2Q96LA5 508 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM83DQ9H4H8 585 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 KCTD5Q9NXV2 234 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 B4GALT7Q9UBV7 327 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GTF2IRD1Q9UHL9 959 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 BTRCQ9Y297 605 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 RAI2Q9Y5P3 530 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ANKRD63C9JTQ0 380 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ACOT7O00154 380 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ALOX5P09917 674 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SLC5A3P53794 718 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GMFBP60983 142 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PPP3R1P63098 170 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 DLG4P78352 724 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 XIAPP98170 497 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 RASGEF1BQ0VAM2 473 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ELOCQ15369 112 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 MZT2AQ6P582 158 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 VSTM1Q6UX27 236 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GCNT7Q6ZNI0 430 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 COX18Q8N8Q8 333 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SLC5A5Q92911 643 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PCDH9Q9HC56 1237 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CCNB1IP1Q9NPC3 277 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CLN6Q9NWW5 311 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GSTK1Q9Y2Q3 226 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 LOC100509620A0A075B734 347 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 C9P02748 559 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 DBTP11182 482 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 TSPAN8P19075 237 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 HSD11B1P28845 292 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 MIPP30301 263 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ITGA1P56199 1179 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SRYQ05066 204 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 C2orf80Q0P641 193 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 MRPL49Q13405 166 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SIM2Q14190 667 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PRMT9Q6P2P2 845 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 NPNTQ6UXI9 565 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 TCAIMQ8N3R3 496 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 INPP4AQ96PE3 977 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 OR2AG1Q9H205 316 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GLOD4Q9HC38 313 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 HAO1Q9UJM8 370 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM172BPA6NC97 362 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 NPEPPSL1A6NEC2 478 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GP5P40197 560 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GRK6P43250 576 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SEC23AQ15436 765 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 XAGE5Q8WWM1 108 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CEP295NLQ96MC4 621 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 FCRL4Q96PJ5 515 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CST11Q9H112 138 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ISPDA4D126 451 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM155AB1AL88 458 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CCRL2O00421 344 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 GATBO75879 557 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 EOMESO95936 686 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ALPPP05187 535 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ALPIP09923 528 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 LTA4HP09960 611 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PTX3P26022 381 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PUM1Q14671 1186 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 HDAC7Q8WUI4 952 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ERVK-18Q9QC07 812 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 NENFQ9UMX5 172 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 REXO2Q9Y3B8 237 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 H0Y8G0 127 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 AXIN1O15169 862 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 BCAS1O75363 584 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ITPRIPL2Q3MIP1 535 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 ZCWPW2Q504Y3 356 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 PTGR2Q8N8N7 351 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CNDP2Q96KP4 475 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CCDC167Q9P0B6 97 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 CD207Q9UJ71 328 aa10.83□□□□□ -0.68
CACNA1C-216ENST00000399638 A0A1W2PQ67 120 aa10.82□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM86B1E9PN63 330 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms