RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TRIM64A6NGJ6 449 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 SLC28A1O00337 649 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 RGS14O43566 566 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 CNPP09543 421 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 NFATC2Q13469 925 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 GLYATQ6IB77 296 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 SULT1C3Q6IMI6 304 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 DHRSXQ8N5I4 330 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 LEMD2Q8NC56 503 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 OR8J3Q8NGG0 315 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 UBTD2Q8WUN7 234 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ACTL8Q9H568 366 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 TIMMDC1Q9NPL8 285 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 EIF3LQ9Y262 564 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ANGPTL3Q9Y5C1 460 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 TAPBPO15533 448 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 SOCS5O75159 536 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 WDR47O94967 919 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 TRBC1P01850 177 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 SOD2P04179 222 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 VARSP26640 1264 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 CAPGP40121 348 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 RPS9P46781 194 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 OR4D2P58180 307 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ABRAXAS2Q15018 415 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 Q6ZNB5 142 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 DNAJB7Q7Z6W7 309 aaPredicted RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ZNF786Q8N393 782 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ZBTB2Q8N680 514 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 BPIFB1Q8TDL5 484 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 ADAMTS16Q8TE57 1224 aa22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 NSUN3Q9H649 340 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 POLR3HQ9Y535 204 aaPredicted RBP22.71■■□□□ 1.23
RABGGTA-202ENST00000399409 EI24O14681 340 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CLOCKO15516 846 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 KATNA1O75449 491 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 TRMUO75648 421 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 SLC25A14O95258 325 aaPredicted RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 GNRH1P01148 92 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CXCL10P02778 98 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 SPATA31D3P0C874 917 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 ACRV1P26436 265 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 SLC5A2P31639 672 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 HSPA7P48741 367 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 ESRRGP62508 458 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 GPR33Q49SQ1 333 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 HABP4Q5JVS0 413 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 MACC1Q6ZN28 852 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 SPATA31D4Q6ZUB0 917 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 FAM217AQ8IXS0 508 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 REM2Q8IYK8 340 aaPredicted RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 ELOVL2Q9NXB9 296 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 OPTCQ9UBM4 332 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CCL27Q9Y4X3 112 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 C1orf232A0A0U1RR37 186 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 GREM1O60565 184 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 GNAO1P09471 354 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 METTL3Q86U44 580 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 RIMKLAQ8IXN7 391 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CBARPQ8N350 705 aaPredicted RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CYGBQ8WWM9 190 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 ACDQ96AP0 544 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 EGFL8Q99944 293 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CHID1Q9BWS9 393 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 BOCQ9BWV1 1114 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 YTHDF1Q9BYJ9 559 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 TM6SF2Q9BZW4 377 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 CD244Q9BZW8 370 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 IL26Q9NPH9 171 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 TSR3Q9UJK0 312 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 FADS3Q9Y5Q0 445 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 ANAPC1Q9H1A4 1944 aa22.7■■□□□ 1.22
RABGGTA-202ENST00000399409 PRRG1O14668 218 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 KCNH1O95259 989 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 EPHB3P54753 998 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 PTPN5P54829 565 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 GRAMD4Q6IC98 578 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ABRAXAS1Q6UWZ7 409 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 LPCAT2Q7L5N7 544 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 TMEM150AQ86TG1 271 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ERI1Q8IV48 349 aaKnown RBP22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 SLAIN1Q8ND83 568 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ADAMTS19Q8TE59 1207 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 HTATIP2Q9BUP3 242 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 RDH14Q9HBH5 336 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 WWOXQ9NZC7 414 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 EVLQ9UI08 416 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 TET1Q8NFU7 2136 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ZFC3H1O60293 1989 aaKnown RBP22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 GLYATL1P3A0A0U1RQE8 302 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 K7ERQ8 282 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 GMNNO75496 209 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 TRIM16O95361 564 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ANXA6P08133 673 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 SLC2A4P14672 509 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 ITGB6P18564 788 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 KIAA0040Q15053 153 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 CDKN3Q16667 212 aa22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 RFTN2Q52LD8 501 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-202ENST00000399409 GPRC6AQ5T6X5 926 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms