RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SGIP1Q9BQI5 828 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 H2AFJQ9BTM1 129 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PCDHGA10Q9Y5H3 936 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PHIPQ8WWQ0 1821 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MROH6A6NGR9 719 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 EI24O14681 340 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PRMT3O60678 531 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RETP07949 1114 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF24P17028 368 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 GPX3P22352 226 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TRIM71Q2Q1W2 868 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 INO80DQ53TQ3 878 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ARMC8Q8IUR7 673 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PYROXD2Q8N2H3 581 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 FBXO39Q8N4B4 442 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CHCHD6Q9BRQ6 235 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM106CQ9BVX2 250 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZDHHC2Q9UIJ5 367 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 BAIAP2Q9UQB8 552 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ADAMTSL1Q8N6G6 1762 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 FAM234BA2RU67 622 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SAGE2PA6NJ88 616 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PPEF2O14830 753 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HMBSP08397 361 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HGFP14210 728 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PRKCQQ04759 706 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TIMM50Q3ZCQ8 353 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SLC36A3Q495N2 470 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SYCE2Q6PIF2 218 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PROSER1Q86XN7 944 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 OR13F1Q8NGS4 319 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ARRDC2Q8TBH0 407 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 COPS5Q92905 334 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MAGEB10Q96LZ2 347 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 FAM193BQ96PV7 902 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TKTL2Q9H0I9 626 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MAGEH1Q9H213 219 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SIAEQ9HAT2 523 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MBD2Q9UBB5 411 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MTRRQ9UBK8 725 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ERVK-11Q9UQG0 969 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PDE10AQ9Y233 779 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 DOCK1Q14185 1865 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HHLA1C9JL84 531 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 OAZ2O95190 189 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RASAL1O95294 804 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 S1PR4O95977 384 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ANXA6P08133 673 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MTHFD2P13995 350 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SLC1A2P43004 574 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CYP4F8P98187 520 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MED22Q15528 200 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TIGD2Q4W5G0 525 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF773Q6PK81 442 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CASP12Q6UXS9 341 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SLC44A2Q8IWA5 706 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CLIP4Q8N3C7 705 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ASCC1Q8N9N2 400 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 BTN2A3PQ96KV6 586 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 FCRL2Q96LA5 508 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CDK5RAP1Q96SZ6 601 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ACAT2Q9BWD1 397 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RGS18Q9NS28 235 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZMYM5Q9UJ78 669 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SNX7Q9UNH6 387 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 NME7Q9Y5B8 376 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 A0A0J9YYE9 177 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 NOBOXO60393 691 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MAFKO60675 156 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ERN1O75460 977 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CLPXO76031 633 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CDK14O94921 469 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PRKAR1AP10644 381 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MTHFD1P11586 935 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ACPPP15309 386 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TCEA1P23193 301 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MTHFRP42898 656 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CPT1AP50416 773 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 OXCT1P55809 520 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RIPPLY1Q0D2K3 151 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM198Q66K66 360 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PLEKHH3Q7Z736 793 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SVOPLQ8N434 492 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TRPM4Q8TD43 1214 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 RASSF5Q8WWW0 418 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 OTUB1Q96FW1 271 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 POLR1EQ9GZS1 481 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ARID2Q68CP9 1835 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 C7orf72A4D263 438 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 M0QX08 132 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 BCKDKO14874 412 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 AIREO43918 545 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SNAI1O95863 264 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms