RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZDHHC20Q5W0Z9 365 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 ERMP1Q7Z2K6 904 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 MILR1Q7Z6M3 343 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 DCBLD1Q8N8Z6 715 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CANT1Q8WVQ1 401 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 RHBDF1Q96CC6 855 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 RPL10LQ96L21 214 aaKnown RBP16.51■□□□□ 0.23
NUP50-202ENST00000396096 ZNF641Q96N77 438 aaPredicted RBP16.51■□□□□ 0.23
NUP50-202ENST00000396096 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CCL27Q9Y4X3 112 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 IGLV3-16A0A075B6K0 115 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 A0A1W2PQ67 120 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ARNTLO00327 626 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 KIAA0355O15063 1070 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 WDR47O94967 919 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 CA8P35219 290 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 FXNQ16595 210 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 CARD16Q5EG05 197 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 LRRC66Q68CR7 880 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 TTC23LQ6PF05 361 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 GALNT13Q8IUC8 556 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 GALNT4Q8N4A0 578 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 SLC45A3Q96JT2 553 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 PPP3R2Q96LZ3 170 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 CORO1BQ9BR76 489 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 CENPKQ9BS16 269 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 COQ10BQ9H8M1 238 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 SNX13Q9Y5W8 968 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 DHRS12A0PJE2 317 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ANKRD28O15084 1053 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ARPC2O15144 300 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 HNRNPRO43390 633 aaKnown RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 DDX6P26196 483 aaKnown RBP eCLIP16.5■□□□□ 0.23
NUP50-202ENST00000396096 HMOX2P30519 316 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 GSK3BP49841 420 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 EPHA5P54756 1037 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 HTRA4P83105 476 aaPredicted RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 PTSQ03393 145 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 LRRC26Q2I0M4 334 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 LIN52Q52LA3 116 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 MTX3Q5HYI7 312 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 KIAA2013Q8IYS2 634 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 NAT14Q8WUY8 206 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ULK4Q96C45 1275 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 NTMT1Q9BV86 223 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 SMG9Q9H0W8 520 aaKnown RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 SEMA6AQ9H2E6 1030 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ALG2Q9H553 416 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ACTL8Q9H568 366 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 ZNF696Q9H7X3 374 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 WWOXQ9NZC7 414 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 OPTCQ9UBM4 332 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 TRPS1Q9UHF7 1281 aa16.5■□□□□ 0.23
NUP50-202ENST00000396096 TSR3Q9UJK0 312 aaKnown RBP16.5■□□□□ 0.23
NUP50-202ENST00000396096 K7EPI3 171 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 CSPG5O95196 566 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 FGF19O95750 216 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 GUCA1CO95843 209 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 GPIP06744 558 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 ENO2P09104 434 aaPredicted RBP16.49■□□□□ 0.23
NUP50-202ENST00000396096 SMIM18P0DKX4 95 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 LHCGRP22888 699 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 JAK1P23458 1154 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 CCR2P41597 374 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 CCNHP51946 323 aaPredicted RBP16.49■□□□□ 0.23
NUP50-202ENST00000396096 ABRAXAS2Q15018 415 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 NR6A1Q15406 480 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 ASTLQ6HA08 431 aaPredicted RBP16.49■□□□□ 0.23
NUP50-202ENST00000396096 CYP20A1Q6UW02 462 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 CLP1Q92989 425 aaKnown RBP16.49■□□□□ 0.23
NUP50-202ENST00000396096 ASIC4Q96FT7 647 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 COPS8Q99627 209 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 EGFL8Q99944 293 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 OSBPL11Q9BXB4 747 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 IRAK3Q9Y616 596 aa16.49■□□□□ 0.23
NUP50-202ENST00000396096 C7orf72A4D263 438 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 A8MX80 341 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 WASH3PC4AMC7 463 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TIPRLO75663 272 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 EBLN1P0CF75 366 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ACRP10323 421 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 GRIA2P42262 883 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 PIK3CGP48736 1102 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TXNL4AP83876 142 aaKnown RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 B4GALNT1Q00973 533 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 LIPEQ05469 1076 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 GBX1Q14549 363 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 DMC1Q14565 340 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 AP5B1Q2VPB7 878 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TIGD2Q4W5G0 525 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 C6orf52Q5T4I8 152 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 PPP4R4Q6NUP7 873 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms