RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 NXPE1Q8N323 547 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 HDDC3Q8N4P3 179 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 TRAM1L1Q8N609 369 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 GPATCH11Q8N954 259 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 TCP10LQ8TDR4 215 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 SCAMP4Q969E2 229 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ERLEC1Q96DZ1 483 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 TSPAN17Q96FV3 270 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 OLFM1Q99784 485 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ZSCAN5AQ9BUG6 496 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 TRIM55Q9BYV6 548 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 SLC13A1Q9BZW2 595 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ABCG8Q9H221 673 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ARHGEF3Q9NR81 526 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 THEGQ9P2T0 379 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
RTN1-203ENST00000395090 MED16Q9Y2X0 877 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ACOT9Q9Y305 439 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 COMMD10Q9Y6G5 202 aa11.27□□□□□ -0.61
RTN1-203ENST00000395090 ESR1P03372 595 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 DHRS4L1P0CG22 281 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 FDXRP22570 491 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 RPS3P23396 243 aaKnown RBP eCLIP11.26□□□□□ -0.61
RTN1-203ENST00000395090 SLC26A3P40879 764 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 CDKN2DP55273 166 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 GUCY1A3Q02108 690 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 ACOX1Q15067 660 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 FAM45BPQ6NSW5 357 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 UBALD2Q8IYN6 164 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 RBFAQ8N0V3 343 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 FAM45AQ8TCE6 357 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
RTN1-203ENST00000395090 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 DTD2Q96FN9 168 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 ELMO2Q96JJ3 720 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 VPS35Q96QK1 796 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 NDNQ99608 321 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
RTN1-203ENST00000395090 RIOK2Q9BVS4 552 aaKnown RBP11.26□□□□□ -0.61
RTN1-203ENST00000395090 C1QTNF1Q9BXJ1 281 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 CAPS2Q9BXY5 557 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 POPDC3Q9HBV1 291 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 PCMTD2Q9NV79 361 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
RTN1-203ENST00000395090 FBXL12Q9NXK8 326 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 TLK1Q9UKI8 766 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 CA14Q9ULX7 337 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
RTN1-203ENST00000395090 PCDHB1Q9Y5F3 818 aa11.26□□□□□ -0.61
RTN1-203ENST00000395090 KANSL1LA0AUZ9 987 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 NEMP1O14524 444 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 PRMT5O14744 637 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 SHOX2O60902 331 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 DNTTP04053 509 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 C6P13671 934 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 ZNF7P17097 686 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 FMO4P31512 558 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SKIV2L2P42285 1042 aaKnown RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 GSK3AP49840 483 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 ITIH4Q14624 930 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SETMARQ53H47 684 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 KYAT3Q6YP21 454 aaKnown RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 BEND4Q6ZU67 534 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SYT13Q7L8C5 426 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 PLD6Q8N2A8 252 aaKnown RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 ANKRD42Q8N9B4 389 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 MFSD2AQ8NA29 543 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 BTN2A2Q8WVV5 523 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 KCNJ9Q92806 393 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SIPA1Q96FS4 1042 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 UBXN10Q96LJ8 280 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 VPS11Q9H270 941 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 CCDC134Q9H6E4 229 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 LMAN1LQ9HAT1 526 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 LTB4R2Q9NPC1 389 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 SLC17A7Q9P2U7 560 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 CD84Q9UIB8 345 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 CRLS1Q9UJA2 301 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 FZD4Q9ULV1 537 aa11.25□□□□□ -0.61
RTN1-203ENST00000395090 MTF2Q9Y483 593 aaPredicted RBP11.25□□□□□ -0.61
RTN1-203ENST00000395090 A0A087X1B8 175 aa11.24□□□□□ -0.61
RTN1-203ENST00000395090 UBA6A0AVT1 1052 aaPredicted RBP11.24□□□□□ -0.61
RTN1-203ENST00000395090 FADS2P1A8MWK0 482 aa11.24□□□□□ -0.61
RTN1-203ENST00000395090 PHGDHO43175 533 aaKnown RBP11.24□□□□□ -0.61
RTN1-203ENST00000395090 PLRG1O43660 514 aaKnown RBP11.24□□□□□ -0.61
RTN1-203ENST00000395090 GLRA3O75311 464 aa11.24□□□□□ -0.61
RTN1-203ENST00000395090 RNASEH2AO75792 299 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms