RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 OR6K2Q8NGY2 324 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 ANKRD49Q8WVL7 239 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 IRF7Q92985 503 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 TM6SF2Q9BZW4 377 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 SYTL2Q9HCH5 934 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 TCAF1Q9Y4C2 921 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 MAGEB16A2A368 324 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 CCL22O00626 93 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 INSIG1O15503 277 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 SH3BP5O60239 455 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 PRLP01236 227 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 DHRS4L1P0CG22 281 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF182P17025 639 aaPredicted RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 STK19P49842 368 aaPredicted RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 COPZ1P61923 177 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 HYAL1Q12794 435 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 PTPRCAPQ14761 206 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TCHHL1Q5QJ38 904 aaPredicted RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TMEM26Q6ZUK4 368 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 HPS6Q86YV9 775 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 NPAS3Q8IXF0 933 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 DCAF4L2Q8NA75 395 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 MRPL38Q96DV4 380 aaKnown RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 ASIC4Q96FT7 647 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 PPP1R2P1Q96PQ5 205 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TRIB3Q96RU7 358 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 NANOGQ9H9S0 305 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 SPHK2Q9NRA0 654 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 C20orf96Q9NUD7 363 aaPredicted RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 A0A0U1RQS6 177 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 CLPXO76031 633 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 CDH1P12830 882 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 SERPINH1P50454 418 aaKnown RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 MLLT10P55197 1068 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 COX10Q12887 443 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 RFTN1Q14699 578 aaPredicted RBP18.73■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF846Q147U1 533 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TCEAL5Q5H9L2 206 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 FAM78AQ5JUQ0 283 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 C6orf10Q5SRN2 563 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 NEK5Q6P3R8 708 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 FGF13Q92913 245 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TIFAQ96CG3 184 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 ZFYVE19Q96K21 471 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 LMAN2LQ9H0V9 348 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 ATP13A2Q9NQ11 1180 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 UCKL1Q9NWZ5 548 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 MAU2Q9Y6X3 613 aa18.73■□□□□ 0.59
CCDC50-202ENST00000392456 TRIOBPQ9H2D6 2365 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 PEX14O75381 377 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 VAPBO95292 243 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 CYBBP04839 570 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 POU2F2P09086 479 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 TYRP14679 529 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 GKP32189 559 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 TTKP33981 857 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 ETV4P43268 484 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 FUT11Q495W5 492 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 TEDDM1Q5T9Z0 273 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 WWP1Q9H0M0 922 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 SFXN1Q9H9B4 322 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 CNOT11Q9UKZ1 510 aaKnown RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF821O75541 412 aaPredicted RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 ARCN1P48444 511 aaKnown RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 DNASE1L3Q13609 305 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 SYCE2Q6PIF2 218 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 KCNMB4Q86W47 210 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 ZC3H7AQ8IWR0 971 aaKnown RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 ATXN7L3BQ96GX2 97 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 NPLQ9BXD5 320 aaPredicted RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 NAA50Q9GZZ1 169 aaKnown RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 IARS2Q9NSE4 1012 aaKnown RBP18.72■□□□□ 0.59
CCDC50-202ENST00000392456 TREX1Q9NSU2 369 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 GIMAP4Q9NUV9 329 aa18.72■□□□□ 0.59
CCDC50-202ENST00000392456 IQANK1A0A1B0GTG1 560 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 OR5K4A6NMS3 321 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 RFPL1O75677 317 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 MT-ND3P03897 115 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 ITIH1P19827 911 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 GMPRP36959 345 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 ALDH18A1P54886 795 aaKnown RBP18.71■□□□□ 0.59
CCDC50-202ENST00000392456 RHOAP61586 193 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 IFITM3Q01628 133 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 UBAP2LQ14157 1087 aaKnown RBP18.71■□□□□ 0.59
CCDC50-202ENST00000392456 INO80DQ53TQ3 878 aaPredicted RBP18.71■□□□□ 0.59
CCDC50-202ENST00000392456 PXDC1Q5TGL8 231 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 UGT3A1Q6NUS8 523 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 ZCCHC8Q6NZY4 707 aaKnown RBP18.71■□□□□ 0.59
CCDC50-202ENST00000392456 LILRA2Q8N149 483 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 FBXW8Q8N3Y1 598 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 PDPRQ8NCN5 879 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 CDKL2Q92772 493 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 TMEM9Q9P0T7 183 aa18.71■□□□□ 0.59
CCDC50-202ENST00000392456 AURKAO14965 403 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 SNPHO15079 494 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.58
CCDC50-202ENST00000392456 ATP5BP06576 529 aaKnown RBP18.71■□□□□ 0.58
CCDC50-202ENST00000392456 SERPINA6P08185 405 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 SNRPAP09012 282 aaKnown RBP18.71■□□□□ 0.58
CCDC50-202ENST00000392456 SLC26A3P40879 764 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms