RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 GIG44P09565 113 aaPredicted RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 PDGFRBP09619 1106 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 OXTRP30559 389 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 HOXC9P31274 260 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 TM4SF4P48230 202 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 PRELPP51888 382 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 CDH15P55291 814 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 MECOMQ03112 1051 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 OS9Q13438 667 aaPredicted RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 EBI3Q14213 229 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 DCAF10Q5QP82 559 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 TXNDC8Q6A555 127 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 LIN54Q6MZP7 749 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 REG3GQ6UW15 175 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 TADA2BQ86TJ2 420 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 CATSPERDQ86XM0 798 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 CCDC117Q8IWD4 279 aaPredicted RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 RAVER1Q8IY67 606 aaKnown RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 PM20D2Q8IYS1 436 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 DNAJC22Q8N4W6 341 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 PAF1Q8N7H5 531 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 NIPA2Q8N8Q9 360 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 ZCRB1Q8TBF4 217 aaKnown RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 PHF10Q8WUB8 498 aaKnown RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 STAG1Q8WVM7 1258 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 ZNF597Q96LX8 424 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 CEP295NLQ96MC4 621 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 HES7Q9BYE0 225 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 USP44Q9H0E7 712 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 TMX4Q9H1E5 349 aaPredicted RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 THRAP3Q9Y2W1 955 aaKnown RBP0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 CEPT1Q9Y6K0 416 aa0.34□□□□□ -2.36
MIR548A3-201ENST00000385297 POGZQ7Z3K3 1410 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 IGHV4-30-2A0A087WSY4 118 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 KIR2DS1A0A191URI9 304 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 LGALS16A8MUM7 142 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 E7ENQ6 273 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 M0QZ24 198 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TFECO14948 347 aaPredicted RBP0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 SNAP91O60641 907 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 GCNT3O95395 438 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 PIGNO95427 931 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 CD5P06127 495 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 ASNSP08243 561 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 CKMT2P17540 419 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 RGRP47804 291 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 KIR2DS1Q14954 304 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 RNPS1Q15287 305 aaKnown RBP0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 GFOD2Q3B7J2 385 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 USP41Q3LFD5 358 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TFDP3Q5H9I0 405 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 ZNF667Q5HYK9 610 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 KRT39Q6A163 491 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 DPPA4Q7L190 304 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TDRPQ86YL5 185 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 CRYBG2Q8N1P7 616 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 MYCT1Q8N699 235 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 C1orf52Q8N6N3 182 aaKnown RBP0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 L3MBTL4Q8NA19 623 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 SLC38A9Q8NBW4 561 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 CSNK1G2-AS1Q8NCQ2 148 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 KBTBD8Q8NFY9 601 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 OR6Y1Q8NGX8 325 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 EXD1Q8NHP7 514 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 PPP4R1Q8TF05 950 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TNIP3Q96KP6 325 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 ACOX2Q99424 681 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 MAP3K3Q99759 626 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 ATF6BQ99941 703 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TDRD1Q9BXT4 1180 aaKnown RBP0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 OBP2BQ9NPH6 170 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 OLFML3Q9NRN5 406 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 ZNF319Q9P2F9 582 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 THAP10Q9P2Z0 257 aaPredicted RBP0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 GTF3C4Q9UKN8 822 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 PLEKHA6Q9Y2H5 1048 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 CSNK1G3Q9Y6M4 447 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 TENM3Q9P273 2699 aa0.33□□□□□ -2.36
MIR548A3-201ENST00000385297 A0A1W2PN81 502 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 A0A1W2PR80 420 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 GOLGA6CA6NDK9 693 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 GOLGA6BA6NDN3 693 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 TMCC2O75069 709 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 PRDM1O75626 825 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 KRT38O76015 456 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 BCL10O95999 233 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 GOLGA6DP0CG33 693 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 CHRNA7P36544 502 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 HERV-K104P61576 105 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 GUCY2DQ02846 1103 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 KLHL26Q53HC5 615 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 DENND5BQ6ZUT9 1274 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 BTN2A1Q7KYR7 527 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 ZNF554Q86TJ5 538 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 SLC5A8Q8N695 610 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 GCSAMQ8N6F7 178 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 C11orf65Q8NCR3 313 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 MAPK15Q8TD08 544 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 TIFAQ96CG3 184 aa0.32□□□□□ -2.36
MIR548A3-201ENST00000385297 FAM122AQ96E09 287 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms