RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GALNT13Q8IUC8 556 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 CELF5Q8N6W0 485 aaKnown RBP22.72■■□□□ 1.23
VPS16-201ENST00000380443 CDYL2Q8N8U2 506 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 FRS2Q8WU20 508 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 RHBDF1Q96CC6 855 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 BTBD9Q96Q07 612 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 EGFL8Q99944 293 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 IPPKQ9H8X2 491 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 HEBP1Q9NRV9 189 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 OPTCQ9UBM4 332 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 DKK3Q9UBP4 350 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 PACSIN3Q9UKS6 424 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 ANGPTL3Q9Y5C1 460 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 A8MX80 341 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 GRXCR1A8MXD5 290 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 CFAP99D6REC4 459 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 SLC16A5O15375 505 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 TAPBPO15533 448 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 SLC22A3O75751 556 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 AP2A2O94973 939 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 MPC1LP0DKB6 136 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 RCAN2Q14206 197 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 TRIP10Q15642 601 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 C6orf136Q5SQH8 315 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 RARS2Q5T160 578 aaKnown RBP22.71■■□□□ 1.23
VPS16-201ENST00000380443 LETMD1Q6P1Q0 360 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 RAVER1Q8IY67 606 aaKnown RBP22.71■■□□□ 1.23
VPS16-201ENST00000380443 CHST14Q8NCH0 376 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 OR52B6Q8NGF0 335 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 SPDL1Q96EA4 605 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 CCDC97Q96F63 343 aaPredicted RBP22.71■■□□□ 1.23
VPS16-201ENST00000380443 NTMT1Q9BV86 223 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 TRIM54Q9BYV2 358 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 SLC52A3Q9NQ40 469 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 WWOXQ9NZC7 414 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 MAP10Q9P2G4 905 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ASB1Q9Y576 335 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 PRSS51A0A1B0GVH4 220 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 K7EPI3 171 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 QSOX1O00391 747 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 C8GP07360 202 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 CAPN1P07384 714 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ANXA5P08758 320 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 EPCAMP16422 314 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 PCSK2P16519 638 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 HMOX2P30519 316 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ADGRE1Q14246 886 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 GBX1Q14549 363 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 PLEKHS1Q5SXH7 462 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 PRR23BQ6ZRT6 265 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 SPATA24Q86W54 205 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 GOLM1Q8NBJ4 401 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ADCY4Q8NFM4 1077 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 OR4F6Q8NGB9 312 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ZUFSPQ96AP4 578 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 ESAMQ96AP7 390 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 MRGPRX3Q96LB0 322 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 PPP3R2Q96LZ3 170 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 MUC13Q9H3R2 512 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 NSUN3Q9H649 340 aaKnown RBP22.71■■□□□ 1.23
VPS16-201ENST00000380443 SUN2Q9UH99 717 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 TRPS1Q9UHF7 1281 aa22.71■■□□□ 1.23
VPS16-201ENST00000380443 FAM234BA2RU67 622 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 MAGEA13PA6NCF6 341 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 SYNCRIPO60506 623 aaKnown RBP22.7■■□□□ 1.22
VPS16-201ENST00000380443 KATNA1O75449 491 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 CAPNS1P04632 268 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 EBLN1P0CF75 366 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 CAPN3P20807 821 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 AOAHP28039 575 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 MRPS22P82650 360 aaKnown RBP22.7■■□□□ 1.22
VPS16-201ENST00000380443 RHDQ02161 417 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 BNIP2Q12982 314 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 TRAF3Q13114 568 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 SP140Q13342 867 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 NEK10Q6ZWH5 1172 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 GRASPQ7Z6J2 395 aaPredicted RBP22.7■■□□□ 1.22
VPS16-201ENST00000380443 RETREG3Q86VR2 466 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 RNF148Q8N7C7 305 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 DCUN1D1Q96GG9 259 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 PBX4Q9BYU1 374 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 TRIM15Q9C019 465 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 VCXQ9H320 206 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 GIMAP2Q9UG22 337 aa22.7■■□□□ 1.22
VPS16-201ENST00000380443 LEF1Q9UJU2 399 aaPredicted RBP22.7■■□□□ 1.22
VPS16-201ENST00000380443 PRORSD1PA6NEY8 169 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 UPK3BL1B0FP48 263 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 UPK3BL2E5RIL1 263 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 SLC28A1O00337 649 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 NUAK1O60285 661 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 EEDO75530 441 aaKnown RBP22.69■■□□□ 1.22
VPS16-201ENST00000380443 HSD17B1P14061 328 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 GGT5P36269 586 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 HSPA7P48741 367 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 MAD2L1Q13257 205 aaPredicted RBP22.69■■□□□ 1.22
VPS16-201ENST00000380443 VPS26BQ4G0F5 336 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 GPR153Q6NV75 609 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 IL27RAQ6UWB1 636 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 Q6ZSR9 355 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 ACOX2Q99424 681 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms