RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NUDT2P50583 147 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PKNOX1P55347 436 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 ERVPABLB-1P60509 514 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 VRK3Q8IV63 474 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 MMAAQ8IVH4 418 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 BEND7Q8N7W2 519 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 GLYATL1Q969I3 302 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 TUBGCP3Q96CW5 907 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 RCN3Q96D15 328 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 VPS35Q96QK1 796 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 NUSAP1Q9BXS6 441 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 NKX1-2Q9UD57 310 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 TICRRQ7Z2Z1 1910 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 DOCK9Q9BZ29 2069 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PSMD12O00232 456 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 OR7A17O14581 309 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 AREL1O15033 823 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 AP2A2O94973 939 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 GDF5P43026 501 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 ELP6Q0PNE2 266 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PTK2BQ14289 1009 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 FASTKQ14296 549 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 GRB7Q14451 532 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 LDLRAP1Q5SW96 308 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PLEKHS1Q5SXH7 462 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 GK5Q6ZS86 529 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PHYKPLQ8IUZ5 450 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 CDYL2Q8N8U2 506 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 KYQ8NBH2 561 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 DTD2Q96FN9 168 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PPP1R16AQ96I34 528 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 TMEM79Q9BSE2 394 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 CD244Q9BZW8 370 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 RNPEPL1Q9HAU8 725 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 PRSS16Q9NQE7 514 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 CACNA2D2Q9NY47 1150 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 POLG2Q9UHN1 485 aa19.49■□□□□ 0.71
PDLIM5-205ENST00000380180 XIRP2A4UGR9 3374 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 NUAK1O60285 661 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 CHEK2O96017 543 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 EIF2DP41214 584 aaKnown RBP19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 RPIAP49247 311 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 EGFLAMQ63HQ2 1017 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 LETMD1Q6P1Q0 360 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 MBOAT1Q6ZNC8 495 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 NET1Q7Z628 596 aaPredicted RBP19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 SKA2Q8WVK7 121 aaPredicted RBP19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 TRPM6Q9BX84 2022 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 IPPKQ9H8X2 491 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 DYRK4Q9NR20 520 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 WWOXQ9NZC7 414 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 CCDC167Q9P0B6 97 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 CKAP5Q14008 2032 aa19.48■□□□□ 0.71
PDLIM5-205ENST00000380180 KPNA5O15131 536 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 INPP4BO15327 924 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CCNT2O60583 730 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CIB2O75838 187 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ARL1P40616 181 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 GRIA2P42262 883 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CREB5Q02930 508 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 TBL3Q12788 808 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CDC16Q13042 620 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ZRSR2Q15696 482 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 AGKQ53H12 422 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 PGM2L1Q6PCE3 622 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 UBE2R2Q712K3 238 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 EFL1Q7Z2Z2 1120 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 DSELQ8IZU8 1212 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 RASGEF1AQ8N9B8 481 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 SNX31Q8N9S9 440 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ELMO1Q92556 727 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ATP6V1E2Q96A05 226 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 TRMT61BQ9BVS5 477 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 EFCAB1Q9HAE3 211 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 PDE10AQ9Y233 779 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CCDC85CA6NKD9 419 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 MMP20O60882 483 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 RECQL5O94762 991 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 FTH1P02794 183 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 HGFP14210 728 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 LBPP18428 481 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ATP4BP51164 291 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 TMEM115Q12893 351 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ITPRIPL2Q3MIP1 535 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 SCIMPQ6UWF3 145 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 EP400NLQ6ZTU2 488 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 CYP2U1Q7Z449 544 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 RAVER1Q8IY67 606 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 OR4F6Q8NGB9 312 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ASB11Q8WXH4 323 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 OPTCQ9UBM4 332 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 ST14Q9Y5Y6 855 aa19.47■□□□□ 0.71
PDLIM5-205ENST00000380180 H0Y3Z8 333 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 TBX10O75333 385 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 VPS4BO75351 444 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 ANXA5P08758 320 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 MPC1LP0DKB6 136 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 CTSCP53634 463 aa19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 TCHHL1Q5QJ38 904 aaPredicted RBP19.46■□□□□ 0.71
PDLIM5-205ENST00000380180 RIPOR1Q6ZS17 1223 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms