RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 VANGL1Q8TAA9 524 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 HDAC2Q92769 488 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 COPS8Q99627 209 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 CNPPD1Q9BV87 410 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 HERC2P3Q9BVR0 1158 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 C11orf16Q9NQ32 467 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 EIF3KQ9UBQ5 218 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SPEF1Q9Y4P9 236 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 CRYBG1Q9Y4K1 1723 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 NT5C1B-RDH14C9J2C7 533 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SLC30A4O14863 429 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 KPNA5O15131 536 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SLC28A2O43868 658 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PRAMEF1O95521 474 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 FGF3P11487 239 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 TM4SF1P30408 202 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SCNN1GP51170 649 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 RORCP51449 518 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 IKBIPQ70UQ0 350 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 KBTBD6Q86V97 674 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PGBD3Q8N328 593 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 KAT2AQ92830 837 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 BARD1Q99728 777 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 C2orf49Q9BVC5 232 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 EIF2B3Q9NR50 452 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 ADARB2Q9NS39 739 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 KCNE2Q9Y6J6 123 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 TIAM2Q8IVF5 1701 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 H7C4K7 107 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 ABCB7O75027 752 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 GADD45GO95257 159 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PENKP01210 267 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 FGF1P05230 155 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 TNNI3P19429 210 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 CCR10P46092 362 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 ACADVLP49748 655 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 DGKQP52824 942 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 UFM1P61960 85 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 DSC2Q02487 901 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PMS2P3Q13401 168 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 DCST1Q5T197 706 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 NANOGP8Q6NSW7 305 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 FBXL19Q6PCT2 694 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PRR23CQ6ZRP0 262 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 COMMD2Q86X83 199 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SIDT2Q8NBJ9 832 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 TEX47Q8TBZ9 253 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 SPPL2BQ8TCT7 592 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 PIK3R3Q92569 461 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 NANOGQ9H9S0 305 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 GLOD4Q9HC38 313 aa4.14□□□□□ -1.75
BRCA2-201ENST00000380152 EIF2B4Q9UI10 523 aaKnown RBP4.14□□□□□ -1.75
BRCA2-201ENST00000380152 A8MV72 311 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 RPP40O75818 363 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ALDOAP04075 364 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 PGRP06401 933 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CCNYL3P0C7X3 344 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 IL7RP16871 459 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ITIH1P19827 911 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CDH5P33151 784 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 MAGEA8P43361 318 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 NUDT6P53370 316 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 PIGGQ5H8A4 983 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 TLDC1Q6P9B6 456 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SLC51AQ86UW1 340 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CAND1Q86VP6 1230 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CACUL1Q86Y37 369 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 OR52L1Q8NGH7 329 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 GRIN3AQ8TCU5 1115 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SLC35F5Q8WV83 523 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 AURKBQ96GD4 344 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 MTERF1Q99551 399 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SPATA5L1Q9BVQ7 753 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ITPAQ9BY32 194 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 RPF2Q9H7B2 306 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ITM2CQ9NQX7 267 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ERVK13-1Q9NX77 482 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 NKIRAS2Q9NYR9 191 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 MALT1Q9UDY8 824 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CARD8Q9Y2G2 431 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 TCAF1Q9Y4C2 921 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 IRAK3Q9Y616 596 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 STON1Q9Y6Q2 735 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SCN2AQ99250 2005 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 CPSF4LA6NMK7 179 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ZW10O43264 779 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 PKMP14618 531 aaKnown RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SIX1Q15475 284 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SOWAHAQ2M3V2 549 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 TNFAIP8L3Q5GJ75 292 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 TPRG1LQ5T0D9 272 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 FKBP1CQ5VVH2 108 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SULT1C3Q6IMI6 304 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SLC39A4Q6P5W5 647 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 SIPA1Q96FS4 1042 aa4.13□□□□□ -1.75
BRCA2-201ENST00000380152 FCRL3Q96P31 734 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-201ENST00000380152 ATP13A3Q9H7F0 1226 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms