RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.77□□□□□ -0.52
EXOSC9-202ENST00000379663 SLC17A4Q9Y2C5 497 aa11.77□□□□□ -0.52
EXOSC9-202ENST00000379663 OR1A2Q9Y585 309 aa11.77□□□□□ -0.52
EXOSC9-202ENST00000379663 SYCE1LA8MT33 242 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 MPC1LP0DKB6 136 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 KIAA1024LP59773 190 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 PFN3P60673 137 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 BOP1Q14137 746 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 KIAA0895LQ68EN5 471 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 FAM47EQ6ZV65 393 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 VRK3Q8IV63 474 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 L3HYPDHQ96EM0 354 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ORAI3Q9BRQ5 295 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 GATA5Q9BWX5 397 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TPSD1Q9BZJ3 242 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 C20orf27Q9GZN8 174 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 RNF112Q9ULX5 631 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TMEM131Q92545 1883 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 KMT2EQ8IZD2 1858 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 GON4LQ3T8J9 2241 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 KLHL33A6NCF5 533 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 POM121BA6NF01 834 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 UBXN8O00124 270 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 LIN7AO14910 233 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 MATN4O95460 622 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 DCNP07585 359 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TPBGLP0DKB5 382 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 NUDT1P36639 197 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 HK3P52790 923 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 HSPA14Q0VDF9 509 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 SP140Q13342 867 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TGFBIQ15582 683 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ABI3BPQ7Z7G0 1075 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 LILRA3Q8N6C8 439 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 FRMD1Q8N878 549 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 PDPRQ8NCN5 879 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 OR2L2Q8NH16 312 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 HM13Q8TCT9 377 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 SREK1Q8WXA9 508 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 DLG3Q92796 817 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 EDAQ92838 391 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 BMFQ96LC9 184 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 SORT1Q99523 831 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 NSRP1Q9H0G5 558 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 PCED1AQ9H1Q7 454 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 RMI1Q9H9A7 625 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 COG4Q9H9E3 785 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 RDH14Q9HBH5 336 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 THAP1Q9NVV9 213 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 NUDT4Q9NZJ9 180 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ADAMTS6Q9UKP5 1117 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 DMTF1Q9Y222 760 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 OARD1Q9Y530 152 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 DNMT3AQ9Y6K1 912 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
EXOSC9-202ENST00000379663 MGAT4DA6NG13 374 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 PRR19A6NJB7 356 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 H0Y8X5 98 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 GFYI3L273 518 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 TOR1BO14657 336 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 STX16O14662 325 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 FPGTO14772 594 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 ITM2AO43736 263 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 SMIM24O75264 130 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 PDGFBP01127 241 aaPredicted RBP11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 FUCA1P04066 466 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 CEACAM5P06731 702 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 NEFHP12036 1026 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 SERPINB5P36952 375 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 CXCL12P48061 93 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 CCR3P51677 355 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 YPEL5P62699 121 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 HERVK_113P63132 956 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 ARHGAP8P85298 464 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 DMPKQ09013 629 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 ASPHQ12797 758 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 STX3Q13277 289 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 PHKG1Q16816 387 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 PIGWQ7Z7B1 504 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 LRRTM4Q86VH4 590 aa11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
EXOSC9-202ENST00000379663 ZNF473Q8WTR7 871 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms