RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CHCHD4Q8N4Q1 142 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM199Q8N511 208 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 KLHL32Q96NJ5 620 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 C2orf49Q9BVC5 232 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MAGEH1Q9H213 219 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ARMC7Q9H6L4 198 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 GOLGA2P5Q9HBQ8 144 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MKLN1Q9UL63 735 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 TOR1BO14657 336 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 IRAK2O43187 625 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SLC35E2BP0CK96 405 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SLC16A1P53985 500 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PNLIPRP1P54315 467 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ARHGAP15Q53QZ3 475 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 FAM171A1Q5VUB5 890 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PGM2L1Q6PCE3 622 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 TMPRSS11AQ6ZMR5 421 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SIDT2Q8NBJ9 832 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PCSK9Q8NBP7 692 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 EFHD2Q96C19 240 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SLC2A13Q96QE2 648 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 NPLQ9BXD5 320 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 DCSTAMPQ9H295 470 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SP140LQ9H930 580 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 DNAJC11Q9NVH1 559 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SMOXQ9NWM0 555 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 B3GNT3Q9Y2A9 372 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MAN2B2Q9Y2E5 1009 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MYOCOSA0A1B0GUC4 107 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PSMD11O00231 422 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 DCLK1O15075 740 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CHST10O43529 356 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 STK16O75716 305 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 TRBC1P01850 177 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 PBLDP30039 288 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 LEPRP48357 1165 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 RPS14P62263 151 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF45Q02386 682 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SLC10A2Q12908 348 aaPredicted RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 STARD3Q14849 445 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 RNF180Q86T96 592 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 CILP2Q8IUL8 1156 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 SUN5Q8TC36 379 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 GANCQ8TET4 914 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MYRFLQ96LU7 910 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 AARSD1Q9BTE6 412 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 FTHL17Q9BXU8 183 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MMP27Q9H306 513 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 NECTIN3Q9NQS3 549 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
PCDH9-202ENST00000377865 MRPL42Q9Y6G3 142 aaKnown RBP8.65□□□□□ -1.02
PCDH9-202ENST00000377865 OR6C75A6NL08 312 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 TBX1O43435 398 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 RSL1D1O76021 490 aaKnown RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 RPN2P04844 631 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 CCR10P46092 362 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ALDH7A1P49419 539 aaKnown RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 RORCP51449 518 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 PHC1P78364 1004 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 EMX2Q04743 252 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 HECTD3Q5T447 861 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ERAP2Q6P179 960 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 PLET1Q6UQ28 207 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 UBE2R2Q712K3 238 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 C16orf59Q7L2K0 433 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 HJURPQ8NCD3 748 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ELMO1Q92556 727 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 KIAA1191Q96A73 305 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 L3HYPDHQ96EM0 354 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF607Q96SK3 696 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 SLC22A4Q9H015 551 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 HSPE1-MOB4S4R3N1 261 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 FADS2P1A8MWK0 482 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 MAGEB17A8MXT2 336 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 LRATO95237 230 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ANXA8P13928 327 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 RFC2P35250 354 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 CXCR3P49682 368 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ACOX1Q15067 660 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 FAM174BQ3ZCQ3 159 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 COLEC12Q5KU26 742 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 TPRG1LQ5T0D9 272 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 RBM20Q5T481 1227 aaKnown RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 DNAJB7Q7Z6W7 309 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF557Q8N988 423 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 C11orf65Q8NCR3 313 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 PYURFQ96I23 114 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 PGLYRP2Q96PD5 576 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 CHCHD6Q9BRQ6 235 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 SLC29A3Q9BZD2 475 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 TM9SF3Q9HD45 589 aa8.65□□□□□ -1.03
PCDH9-202ENST00000377865 CCDC59Q9P031 241 aaKnown RBP8.65□□□□□ -1.03
PCDH9-202ENST00000377865 EMCNQ9ULC0 261 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms