RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZFPM2Q8WW38 1151 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 PMEPA1Q969W9 287 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 TTC1Q99614 292 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 RAB33BQ9H082 229 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 EPHA6Q9UF33 1036 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 B3GALT1Q9Y5Z6 326 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 CFAP20Q9Y6A4 193 aaKnown RBP16.45■□□□□ 0.22
HMGN4-201ENST00000377575 MGAQ8IWI9 3026 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 EIF4E1BA6NMX2 242 aaKnown RBP16.44■□□□□ 0.22
HMGN4-201ENST00000377575 AP3B1O00203 1094 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 ZSCAN5DPP0CG00 497 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 NDUFS1P28331 727 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 FOXN2P32314 431 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 ARSDP51689 593 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 GSE1Q14687 1217 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 TGIF1Q15583 401 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 SOWAHCQ53LP3 525 aaPredicted RBP16.44■□□□□ 0.22
HMGN4-201ENST00000377575 TSTD2Q5T7W7 516 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 LYPLAL1Q5VWZ2 237 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 ANKS6Q68DC2 871 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 IRGCQ6NXR0 463 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 PACS1Q6VY07 963 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 DTX1Q86Y01 620 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 PIANPQ8IYJ0 282 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 OR13J1Q8NGT2 312 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 PEX13Q92968 403 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 RMDN2Q96LZ7 410 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 INSM2Q96T92 566 aaPredicted RBP16.44■□□□□ 0.22
HMGN4-201ENST00000377575 ZNF768Q9H5H4 540 aaKnown RBP16.44■□□□□ 0.22
HMGN4-201ENST00000377575 COG4Q9H9E3 785 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 FBXO8Q9NRD0 319 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 TCAF1Q9Y4C2 921 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 COLEC10Q9Y6Z7 277 aa16.44■□□□□ 0.22
HMGN4-201ENST00000377575 SMG1Q96Q15 3661 aaKnown RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 CCDC162PA2VCL2 907 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 F8W8V4 182 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 ERVH48-1M5A8F1 160 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 IFRD1O00458 451 aaPredicted RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 ATXN7O15265 892 aaPredicted RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 ZSCAN12O43309 604 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 POLBP06746 335 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 PRSS56P0CW18 603 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 GRIA1P42261 906 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 LEPRP48357 1165 aaKnown RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 PRAMEP78395 509 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 RPA4Q13156 261 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 KRT33BQ14525 404 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 DUS1LQ6P1R4 473 aaKnown RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 CYB5D1Q6P9G0 228 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 XKR5Q6UX68 686 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 OOSP2Q86WS3 158 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 PBKQ96KB5 322 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 NAP1L3Q99457 506 aaPredicted RBP16.43■□□□□ 0.22
HMGN4-201ENST00000377575 KIR3DX1Q9H7L2 352 aa16.43■□□□□ 0.22
HMGN4-201ENST00000377575 OR5K3A6NET4 321 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 OR51F1A6NGY5 319 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 POLR1CO15160 346 aaPredicted RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 GOT2P00505 430 aaKnown RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 FTH1P02794 183 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 PPARGP37231 505 aaPredicted RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 KCNJ1P48048 391 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 ACVR1Q04771 509 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CACHD1Q5VU97 1274 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CERS6Q6ZMG9 384 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 FAM92BQ6ZTR7 304 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 VASH2Q86V25 355 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 LILRA3Q8N6C8 439 aaPredicted RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CLDN19Q8N6F1 224 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 ZSCAN1Q8NBB4 408 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 LSM14AQ8ND56 463 aaKnown RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 JPH3Q8WXH2 748 aaPredicted RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 HDAC10Q969S8 669 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CD180Q99467 661 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 CTRCQ99895 268 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 IL22Q9GZX6 179 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 SIDT1Q9NXL6 827 aaKnown RBP16.42■□□□□ 0.22
HMGN4-201ENST00000377575 SLC2A6Q9UGQ3 507 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 SLC24A2Q9UI40 661 aa16.42■□□□□ 0.22
HMGN4-201ENST00000377575 TK2O00142 265 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 LIN7AO14910 233 aaPredicted RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 OR56A5P0C7T3 313 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 TPSB2P20231 275 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 CD151P48509 253 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 SEPHS1P49903 392 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 SESN2P58004 480 aaPredicted RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 CDK16Q00536 496 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 FOXM1Q08050 763 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 TPSAB1Q15661 275 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 ZNF658BQ4V348 819 aaPredicted RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 FASTKD1Q53R41 847 aaKnown RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 AARS2Q5JTZ9 985 aaKnown RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 PCID2Q5JVF3 399 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 DNTTIP2Q5QJE6 756 aaKnown RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 ARMC6Q6NXE6 501 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms