RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 H0Y858 1186 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 SBK3P0C264 359 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 SEC13P55735 322 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 CARTPTQ16568 116 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 ZNF513Q8N8E2 541 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 GATA6Q92908 595 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 TEX37Q96LM6 180 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 INSL5Q9Y5Q6 135 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 CROCCQ5TZA2 2017 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 DOCK6Q96HP0 2047 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 LDLRP01130 860 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 S100A3P33764 101 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 SPANXN4Q5MJ08 99 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 CHST9Q7L1S5 443 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 GET4Q7L5D6 327 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 TMPRSS11BQ86T26 416 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 PLD3Q8IV08 490 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 CFAP206Q8IYR0 622 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 LKAAEAR1Q8TD35 194 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 JPH3Q8WXH2 748 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 MGAT4DA6NG13 374 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 PDZK1P1A8MUH7 402 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 ALDOCP09972 364 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 CPOXP36551 454 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 ETV3P41162 512 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 MAGEA6P43360 314 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 SH3BGRP55822 239 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 MGAT3Q09327 533 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 DCTN2Q13561 401 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 MAPK11Q15759 364 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 SPDYE7PQ495Y7 208 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 SETMARQ53H47 684 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 UTP15Q8TED0 518 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 STN1Q9H668 368 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 BRD9Q9H8M2 597 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 ATXN1LP0C7T5 689 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 HOXD8P13378 290 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 COX7A2P14406 83 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 RNF144AP50876 292 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 MTTPP55157 894 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 DSC3Q14574 896 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 TCTN1Q2MV58 587 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 PAGE3Q5JUK9 113 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 PDSS2Q86YH6 399 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 LILRA3Q8N6C8 439 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 OR5AK3PQ8NH89 298 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 MAF1Q9H063 256 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 KLHL25Q9H0H3 589 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 RAPGEFL1Q9UHV5 662 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 RPL26L1Q9UNX3 145 aaKnown RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 ZNF451Q9Y4E5 1061 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 STK25O00506 426 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 DFNA5O60443 496 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 FGF18O76093 207 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 ANXA5P08758 320 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 MYOGP15173 224 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 HOXD9P28356 352 aaPredicted RBP11.49□□□□□ -0.57
DDR1-227ENST00000376570 BDKRB1P46663 353 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 NAA20P61599 178 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 CDKL1Q00532 357 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 USP45Q70EL2 814 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 RDH11Q8TC12 318 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 TMIGD2Q96BF3 282 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 PPP1R2P1Q96PQ5 205 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 GSTO2Q9H4Y5 243 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 POLR1BQ9H9Y6 1135 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 B4GALT6Q9UBX8 382 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 SORCS3Q9UPU3 1222 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 MYOFQ9NZM1 2061 aa11.49□□□□□ -0.57
DDR1-227ENST00000376570 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 KLHL33A6NCF5 533 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 B4GAT1O43505 415 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 CYP11A1P05108 521 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 DGKAP23743 735 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 LEPRP48357 1165 aaKnown RBP11.48□□□□□ -0.57
DDR1-227ENST00000376570 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 ZNF135P52742 658 aaPredicted RBP11.48□□□□□ -0.57
DDR1-227ENST00000376570 ARF5P84085 180 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 ABRAXAS2Q15018 415 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 ATP13A5Q4VNC0 1218 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 LETMD1Q6P1Q0 360 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 ITIH5Q86UX2 942 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 RIOK2Q9BVS4 552 aaKnown RBP11.48□□□□□ -0.57
DDR1-227ENST00000376570 ADGRE2Q9UHX3 823 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 ANAPC2Q9UJX6 822 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.48□□□□□ -0.57
DDR1-227ENST00000376570 EVPLLA8MZ36 301 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 TPST2O60704 377 aa11.48□□□□□ -0.57
DDR1-227ENST00000376570 STK16O75716 305 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms