RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 RMND5BQ96G75 393 aaPredicted RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 RPL10LQ96L21 214 aaKnown RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 ZNF597Q96LX8 424 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 CIB1Q99828 191 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 BOCQ9BWV1 1114 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 ZBP1Q9H171 429 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 ASB8Q9H765 288 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 EIF2B4Q9UI10 523 aaKnown RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 INTS6Q9UL03 887 aaKnown RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 CORINQ9Y5Q5 1042 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 PRORSD1PA6NEY8 169 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 NR5A2O00482 541 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 ESRRBO95718 433 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 MLYCDO95822 493 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 GNAO1P09471 354 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CTSAP10619 480 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CKMT2P17540 419 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CDKN3Q16667 212 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 PTRHD1Q6GMV3 140 aaKnown RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 C8orf82Q6P1X6 216 aaPredicted RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 SCIMPQ6UWF3 145 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 TMEM126BQ8IUX1 230 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 TBC1D15Q8TC07 691 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 THAP11Q96EK4 314 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 SLC46A2Q9BY10 475 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CIPCQ9C0C6 399 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 SPAG4Q9NPE6 437 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 ABCB8Q9NUT2 735 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 SUCOQ9UBS9 1254 aaKnown RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 PCDHB1Q9Y5F3 818 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 C9JVG2 144 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 LEFTY2O00292 366 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 E2F3O00716 465 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 ZNF7P17097 686 aaPredicted RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 UGT1A6P19224 532 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 UGT1A1P22309 533 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 UGT1A4P22310 534 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 UGT1A3P35503 534 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 UGT1A5P35504 534 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 PPM1AP35813 382 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 HSPA13P48723 471 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CSNK1DP48730 415 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 MAPK10P53779 464 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 C21orf59P57076 290 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
MSH5-202ENST00000375740 PLEKHG6Q3KR16 790 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 VPS26BQ4G0F5 336 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 MPP7Q5T2T1 576 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 GPR141Q7Z602 305 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 DLG3Q92796 817 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 ACOX2Q99424 681 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 SLC39A3Q9BRY0 314 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CLPBQ9H078 707 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 TMEM181Q9P2C4 612 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 CD300AQ9UGN4 299 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
MSH5-202ENST00000375740 VPS4BO75351 444 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CXCL14O95715 111 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 TIMP1P01033 207 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 C8AP07357 584 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 UROSP10746 265 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 SEMG2Q02383 582 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 RPS6KA2Q15349 733 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CYP2A13Q16696 494 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 LRRC26Q2I0M4 334 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 LILRA6Q6PI73 481 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 ZSWIM9Q86XI8 627 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CLDN19Q8N6F1 224 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 PCYOX1LQ8NBM8 494 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 PDLIM5Q96HC4 596 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 C17orf80Q9BSJ5 609 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 SDR39U1Q9NRG7 319 aaPredicted RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 FADS3Q9Y5Q0 445 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 OR4F21O95013 312 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 IGSF6O95976 241 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 BPIP17213 487 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 NFKBIAP25963 317 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 TMED10P49755 219 aaKnown RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 CLCN2P51788 898 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 DIO3P55073 304 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 CREMQ03060 361 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 NFATC2Q13469 925 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 ZNF829Q3KNS6 432 aaPredicted RBP13.76□□□□□ -0.21
MSH5-202ENST00000375740 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
MSH5-202ENST00000375740 GPRIN3Q6ZVF9 776 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms