RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 XKR7Q5GH72 579 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 CLVS1Q8IUQ0 354 aaPredicted RBP16.78■□□□□ 0.28
RXRB-201ENST00000374680 HS6ST3Q8IZP7 471 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 PLD4Q96BZ4 506 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 ULK4Q96C45 1275 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 MYRFLQ96LU7 910 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 BEGAINQ9BUH8 593 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 ARMC1Q9NVT9 282 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 VAPAQ9P0L0 249 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 LOC730098B7Z3J9 87 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 CD70P32970 193 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 TXNL4AP83876 142 aaKnown RBP16.78■□□□□ 0.28
RXRB-201ENST00000374680 APOFQ13790 326 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 BTG3Q14201 252 aaPredicted RBP16.78■□□□□ 0.28
RXRB-201ENST00000374680 IMPG1Q17R60 797 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 TMEM150AQ86TG1 271 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 BBS7Q8IWZ6 715 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 LRRC43Q8N309 656 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 ANKFN1Q8N957 763 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.78■□□□□ 0.28
RXRB-201ENST00000374680 ZUFSPQ96AP4 578 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 ASIC4Q96FT7 647 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 CENPNQ96H22 339 aaPredicted RBP16.78■□□□□ 0.28
RXRB-201ENST00000374680 TMEM169Q96HH4 297 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 PNPLA3Q9NST1 481 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 CEPT1Q9Y6K0 416 aa16.78■□□□□ 0.28
RXRB-201ENST00000374680 SCN5AQ14524 2016 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 AQP12BA6NM10 295 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 ZNF7P17097 686 aaPredicted RBP16.77■□□□□ 0.28
RXRB-201ENST00000374680 BPIP17213 487 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 GABRR2P28476 465 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 HMGCLP35914 325 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 RPL26P61254 145 aaKnown RBP16.77■□□□□ 0.28
RXRB-201ENST00000374680 PRMT9Q6P2P2 845 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 TXNDC11Q6PKC3 985 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 AQP12AQ8IXF9 295 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 DTWD1Q8N5C7 304 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 PDZD8Q8NEN9 1154 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 CDC26Q8NHZ8 85 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 NCSTNQ92542 709 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 NSMCE2Q96MF7 247 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 ELAC1Q9H777 363 aaKnown RBP16.77■□□□□ 0.28
RXRB-201ENST00000374680 U3KQV3 271 aa16.77■□□□□ 0.28
RXRB-201ENST00000374680 CAPNS1P04632 268 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 EFNA1P20827 205 aaPredicted RBP16.77■□□□□ 0.27
RXRB-201ENST00000374680 EEF1B2P24534 225 aaKnown RBP16.77■□□□□ 0.27
RXRB-201ENST00000374680 HOXD10P28358 340 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 NEDD8Q15843 81 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 TMEM259Q4ZIN3 620 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 LCN8Q6JVE9 175 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 STK32CQ86UX6 486 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 CDK5RAP1Q96SZ6 601 aaKnown RBP16.77■□□□□ 0.27
RXRB-201ENST00000374680 IKZF5Q9H5V7 419 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 CFAP97Q9P2B7 532 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 VPS9D1Q9Y2B5 631 aa16.77■□□□□ 0.27
RXRB-201ENST00000374680 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.27
RXRB-201ENST00000374680 TYW5A2RUC4 315 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 PGLSO95336 258 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 ALDH1A1P00352 501 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 CDH2P19022 906 aaPredicted RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 CCT8P50990 548 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 HTRA3P83110 453 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 BNIP2Q12982 314 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 NFATC2Q13469 925 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 AARS2Q5JTZ9 985 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 SPANXN4Q5MJ08 99 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 MRPL9Q9BYD2 267 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 RBM38Q9H0Z9 239 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 P2RY12Q9H244 342 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 CLK4Q9HAZ1 481 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 ZNF490Q9ULM2 529 aaPredicted RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 CDC14AQ9UNH5 594 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 LSM1O15116 133 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 GSTA4O15217 222 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 ACOX3O15254 700 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 RAD51BO15315 384 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 NOBOXO60393 691 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 VPS4BO75351 444 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 EEDO75530 441 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 LDLRP01130 860 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 C1QCP02747 245 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 PRR35P0CG20 571 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 DGKKQ5KSL6 1271 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 OGFOD2Q6N063 350 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 GCNT7Q6ZNI0 430 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 ADAMTS19Q8TE59 1207 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 CAPNS2Q96L46 248 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 ZNF382Q96SR6 550 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 TRIM54Q9BYV2 358 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 OPTCQ9UBM4 332 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 LIMD1Q9UGP4 676 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 EBF1Q9UH73 591 aa16.76■□□□□ 0.27
RXRB-201ENST00000374680 CNOT11Q9UKZ1 510 aaKnown RBP16.76■□□□□ 0.27
RXRB-201ENST00000374680 RIMKLBQ9ULI2 386 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms