RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 SETMARQ53H47 684 aaPredicted RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ZNF549Q6P9A3 640 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 LILRA2Q8N149 483 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 BEND7Q8N7W2 519 aaPredicted RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SH3RF2Q8TEC5 729 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SCAMP4Q969E2 229 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TMIGD2Q96BF3 282 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SLC47A1Q96FL8 570 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 PSKH2Q96QS6 385 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ARIH1Q9Y4X5 557 aaPredicted RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 LCHNA4D1U4 455 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 STC2O76061 302 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 POLR2EP19388 210 aaKnown RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DPP6P42658 865 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 RFX3P48380 749 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ERVK-8P63133 956 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 HERC3Q15034 1050 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 C6orf136Q5SQH8 315 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ANKRD26P1Q6NSI1 321 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SPATA19Q7Z5L4 167 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 KRTCAP2Q8N6L1 136 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 NOL6Q9H6R4 1146 aaKnown RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 INTS10Q9NVR2 710 aaKnown RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DOLKQ9UPQ8 538 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 GSRP00390 522 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 CYP11A1P05108 521 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ZNF33AQ06730 810 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MDGA1Q8NFP4 955 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ARRDC2Q8TBH0 407 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 C1QTNF1Q9BXJ1 281 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 EMILIN2Q9BXX0 1053 aa17.41■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TOR1BO14657 336 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 FAM20BO75063 409 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 OAZ2O95190 189 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SPAM1P38567 509 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 PIGFQ07326 219 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 CHIT1Q13231 466 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ARHGAP15Q53QZ3 475 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 OR52E8Q6IFG1 317 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■□ 23.7
TRAF3IP1-201ENST00000373327 GOLGA7Q7Z5G4 137 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 RTN4RL1Q86UN2 441 aaPredicted RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SLC22A15Q8IZD6 547 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 APCDD1Q8J025 514 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 KCNN1Q92952 543 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MIEF1Q9NQG6 463 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ILVBLA1L0T0 632 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SOCS2O14508 198 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MAGP20916 626 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ITGADQ13349 1161 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DCTN2Q13561 401 aaKnown RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 XKR4Q5GH76 650 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TSPAN33Q86UF1 283 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TBC1D21Q8IYX1 336 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SMURF2Q9HAU4 748 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SUCOQ9UBS9 1254 aaKnown RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 PADI4Q9UM07 663 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ZNF840PA6NDX5 716 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 TMEM247A6NEH6 219 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 UBFD1O14562 309 aaKnown RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SMAD6O43541 496 aaKnown RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 EPN2O95208 641 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DNAJB13P59910 316 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MERTKQ12866 999 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SLC13A3Q8WWT9 602 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SLC30A3Q99726 388 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 CXorf21Q9HAI6 301 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SLC22A14Q9Y267 594 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
TRAF3IP1-201ENST00000373327 HTRA2O43464 458 aaPredicted RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DFNA5O60443 496 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 RSL1D1O76021 490 aaKnown RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SNAP29O95721 258 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ALDOCP09972 364 aaKnown RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 CDH2P19022 906 aaPredicted RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SGSHP51688 502 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 PAGE3Q5JUK9 113 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 RD3Q7Z3Z2 195 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ZC3H7AQ8IWR0 971 aaKnown RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DDHD1Q8NEL9 900 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SORCS1Q8WY21 1168 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 CERS4Q9HA82 394 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 ZNF556Q9HAH1 456 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SNX6Q9UNH7 406 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 DMTF1Q9Y222 760 aa17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 SAMHD1Q9Y3Z3 626 aaKnown RBP17.39■□□□□ 0.38
TRAF3IP1-201ENST00000373327 PRKD3O94806 890 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 OR4D2P58180 307 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 ADAM17P78536 824 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 NANOGP8Q6NSW7 305 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 MTG2Q9H4K7 406 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 NANOGQ9H9S0 305 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 FARSBQ9NSD9 589 aaKnown RBP17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 LOC100506127A0A0U1RQW1 187 aa17.39■□□□□ 0.37
TRAF3IP1-201ENST00000373327 GPC1P35052 558 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms