RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PRAMEP78395 509 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 CCDC173Q0VFZ6 552 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 RPA4Q13156 261 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 GPR150Q8NGU9 434 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 GRK7Q8WTQ7 553 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 SLCO2A1Q92959 643 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.57■□□□□ 0.72
TMEM53-205ENST00000372244 TTC1Q99614 292 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 DPH1Q9BZG8 443 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 RAB33BQ9H082 229 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 OR52A5Q9H2C5 316 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 COG4Q9H9E3 785 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 PCYOX1Q9UHG3 505 aa19.57■□□□□ 0.72
TMEM53-205ENST00000372244 AGRPO00253 132 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 QSOX1O00391 747 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 FANCGO15287 622 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 AMD1P17707 334 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 CSTF2P33240 577 aaKnown RBP eCLIP19.56■□□□□ 0.72
TMEM53-205ENST00000372244 MAPK9P45984 424 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 TLE3Q04726 772 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 SEMA3AQ14563 771 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 FASTKD1Q53R41 847 aaKnown RBP19.56■□□□□ 0.72
TMEM53-205ENST00000372244 C19orf48Q6RUI8 117 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 LRRC69Q6ZNQ3 347 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 SPACA3Q8IXA5 215 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 USP7Q93009 1102 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 MFSD3Q96ES6 412 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 RMDN2Q96LZ7 410 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 C12orf66Q96MD2 445 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 NAPGQ99747 312 aaPredicted RBP19.56■□□□□ 0.72
TMEM53-205ENST00000372244 IMP3Q9NV31 184 aaKnown RBP19.56■□□□□ 0.72
TMEM53-205ENST00000372244 SYBUQ9NX95 663 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 FAM8A1Q9UBU6 413 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 SOX13Q9UN79 622 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 CFAP20Q9Y6A4 193 aaKnown RBP19.56■□□□□ 0.72
TMEM53-205ENST00000372244 SAR1BQ9Y6B6 198 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 FAM208BQ5VWN6 2430 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 PIKFYVEQ9Y2I7 2098 aa19.56■□□□□ 0.72
TMEM53-205ENST00000372244 B4E171 279 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 C9orf172C9J069 976 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 TOX3O15405 576 aaPredicted RBP19.55■□□□□ 0.72
TMEM53-205ENST00000372244 TMEM63AO94886 807 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 ANKRD34CP0C6C1 535 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 SLC35G4P0C7Q5 338 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 ARNTP27540 789 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 PDHA2P29803 388 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 TSPAN7P41732 249 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 CAPZBP47756 277 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 CD151P48509 253 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 BMPERQ8N8U9 685 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 RSC1A1Q92681 617 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 C9orf72Q96LT7 481 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 KIR3DX1Q9H7L2 352 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 MARCH4Q9P2E8 410 aaPredicted RBP19.55■□□□□ 0.72
TMEM53-205ENST00000372244 PCDHGA3Q9Y5H0 932 aa19.55■□□□□ 0.72
TMEM53-205ENST00000372244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
TMEM53-205ENST00000372244 MAGEB16A2A368 324 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 CTAGE9A4FU28 777 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 A8MU76 341 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 CD3EAPO15446 510 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 CAPN5O15484 640 aaPredicted RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 PPARGP37231 505 aaPredicted RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 MAGEA3P43357 314 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 PPM1FP49593 454 aaPredicted RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 TERF1P54274 439 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 GFERP55789 205 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 COL28A1Q2UY09 1125 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 AARS2Q5JTZ9 985 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 SNAP47Q5SQN1 464 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 NAT8LQ8N9F0 302 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 KCNE4Q8WWG9 221 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 NAF1Q96HR8 494 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 TAAR9Q96RI9 348 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 DDX47Q9H0S4 455 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 XAB2Q9HCS7 855 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 CATSPERZQ9NTU4 200 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 OCIAD1Q9NX40 245 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 SLC24A2Q9UI40 661 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 HEBP2Q9Y5Z4 205 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 COLEC10Q9Y6Z7 277 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 SDR42E2A6NKP2 422 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 LIN7AO14910 233 aaPredicted RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 PRAMEF10O60809 474 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 FTH1P02794 183 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 OR56A5P0C7T3 313 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 NDUFS1P28331 727 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 PTGIRP43119 386 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 ABCG1P45844 678 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 ARCN1P48444 511 aaKnown RBP19.54■□□□□ 0.72
TMEM53-205ENST00000372244 MAPK10P53779 464 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 CES3Q6UWW8 571 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 MPP5Q8N3R9 675 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 ZDHHC12Q96GR4 267 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 FOXJ2Q9P0K8 574 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 SEMA5BQ9P283 1151 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 ANAPC5Q9UJX4 755 aa19.54■□□□□ 0.72
TMEM53-205ENST00000372244 SLC5A10A0PJK1 596 aa19.53■□□□□ 0.72
TMEM53-205ENST00000372244 VAPBO95292 243 aa19.53■□□□□ 0.72
TMEM53-205ENST00000372244 PREPP48147 710 aa19.53■□□□□ 0.72
TMEM53-205ENST00000372244 LEPRP48357 1165 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms