RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NELFEP18615 380 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 CDH3P22223 829 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC6A4P31645 630 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 OXCT1P55809 520 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 EEFSECP57772 596 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 MS4A13Q5J8X5 152 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RBM48Q5RL73 367 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 GPR107Q5VW38 600 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NANOGP8Q6NSW7 305 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PRR23BQ6ZRT6 265 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 KCTD8Q6ZWB6 473 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PROSER1Q86XN7 944 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 MIER2Q8N344 545 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SFRP1Q8N474 314 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 CPA6Q8N4T0 437 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NAT16Q8N8M0 369 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ACDQ96AP0 544 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UBXN10Q96LJ8 280 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 OMDQ99983 421 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PSME2Q9UL46 239 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ANAPC1Q9H1A4 1944 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 DOCK8Q8NF50 2099 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 OBSL1O75147 1896 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 A0A0J9YYE9 177 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 A0A1W2PPW3 197 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BOLA2-SMG1P6H3BVE0 249 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 PAPSS2O95340 614 aaPredicted RBP11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BCL10O95999 233 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CYP17A1P05093 508 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 GNAO1P09471 354 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 ARNTP27540 789 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC1A2P43004 574 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 LEPRP48357 1165 aaKnown RBP11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BMXP51813 675 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 EPS8Q12929 822 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 FXNQ16595 210 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT3A2Q3SY77 523 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 ANKDD1AQ495B1 522 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CYBRD1Q53TN4 286 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 PIK3R6Q5UE93 754 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BROXQ5VW32 411 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 TP53INP2Q8IXH6 220 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 UBALD2Q8IYN6 164 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 LGI2Q8N0V4 545 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 NPWQ8N729 165 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 KIAA1958Q8N8K9 716 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC35B4Q969S0 331 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 IL12RB2Q99665 862 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BDH2Q9BUT1 245 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 BBS2Q9BXC9 721 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC2A4RGQ9NR83 387 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 ANAPC2Q9UJX6 822 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 PCDHA9Q9Y5H5 950 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 VCANP13611 3396 aa11.3□□□□□ -0.6
TSPAN1-201ENST00000372003 CROCCQ5TZA2 2017 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 C16orf96A6NNT2 1141 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 UBXN8O00124 270 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CLPXO76031 633 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 LATS1O95835 1130 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ADH1CP00326 375 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 LDLRP01130 860 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 JCHAINP01591 159 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CYBBP04839 570 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ALOX5P09917 674 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ADH5P11766 374 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 TACR2P21452 398 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CD72P21854 359 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC6A2P23975 617 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 GJA4P35212 333 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ADRA1AP35348 466 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SGSHP51688 502 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 MLLT6P55198 1093 aaPredicted RBP11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ZXDAP98168 799 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CTBP1Q13363 440 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CSHL1Q14406 222 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF846Q147U1 533 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 PPP1R3AQ16821 1122 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 MPPE1Q53F39 396 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms